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扩增差异基因表达微阵列

Amplified differential gene expression microarray.

作者信息

Chen Zhijian J, Tew Kenneth D

机构信息

Department of Pharmacology, Fox Chase Cancer Center, Philadelphia, PA, USA.

出版信息

Methods Mol Biol. 2004;258:95-106. doi: 10.1385/1-59259-751-3:95.

Abstract

Amplified Differential Gene Expression (ADGE) and DNA microarray provides a new concept that the ratios of differentially expressed genes are magnified prior to detecting them. The ratio magnification is achieved with the integration of DNA reassociation and polymerase chain reaction (PCR) amplification and ensured with the design of the adapters and primers. The ADGE technique can be used either as a stand-alone method or in series with DNA microarray. ADGE is used in sample preprocessing and DNA microarray is used as a displaying system in the series combination. The combination of ADGE and DNA microarray provides a mutual complement of their strengths: the magnification of ratios of differential gene expression improves the detection sensitivity; the PCR amplification and efficient labeling enhance the signal intensity and reduce the requirement for large amounts of starting material; and the high throughput for DNA microarray is maintained.

摘要

扩增差异基因表达(ADGE)和DNA微阵列提供了一个新的概念,即在检测差异表达基因之前先放大其比例。通过DNA重退火和聚合酶链反应(PCR)扩增的整合实现比例放大,并通过衔接子和引物的设计确保放大效果。ADGE技术既可以作为一种独立的方法使用,也可以与DNA微阵列串联使用。在串联组合中,ADGE用于样品预处理,而DNA微阵列用作显示系统。ADGE和DNA微阵列的结合实现了优势互补:差异基因表达比例的放大提高了检测灵敏度;PCR扩增和高效标记增强了信号强度,减少了对大量起始材料的需求;同时保持了DNA微阵列的高通量特性。

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Amplified differential gene expression microarray.扩增差异基因表达微阵列
Methods Mol Biol. 2004;258:95-106. doi: 10.1385/1-59259-751-3:95.

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