Williams Dudley H, Davies Nichola L, Zerella Rosa, Bardsley Ben
Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, UK.
J Am Chem Soc. 2004 Feb 25;126(7):2042-9. doi: 10.1021/ja039409p.
Changes in the relative populations of the monomer and asymmetric dimer forms of ristocetin A, upon binding of two molecules of ligand, suggest that ligand binding is negatively cooperative with respect to dimerization. However, strong hydrogen bonds formed in the binding sites of the ligands are reinforced in the dimer relative to the monomer, and the barrier to dissociation of the dimer is increased upon binding of the ligands. It is concluded that the interactions which are common in the binding of both ligands are made with positive cooperativity with respect to those involved in dimerization. The conclusions are relevant to the binding of ligands to proteins, where ligand binding energy can be derived from stabilization of the protein in its ligand-bound form.
瑞斯托菌素A的单体和不对称二聚体形式的相对数量在结合两个配体分子后发生变化,这表明配体结合相对于二聚化是负协同的。然而,相对于单体,在配体结合位点形成的强氢键在二聚体中得到加强,并且在结合配体后二聚体解离的障碍增加。可以得出结论,两种配体结合中常见的相互作用相对于参与二聚化的相互作用是以正协同性进行的。这些结论与配体与蛋白质的结合有关,其中配体结合能可源自蛋白质在其配体结合形式中的稳定性。