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基因重排断点数据库(GRaBD)

Gross Rearrangement Breakpoint Database (GRaBD).

作者信息

Abeysinghe Shaun S, Stenson Peter D, Krawczak Michael, Cooper David N

机构信息

Institute of Medical Genetics, University of Wales College of Medicine, Cardiff, United Kingdom.

出版信息

Hum Mutat. 2004 Mar;23(3):219-21. doi: 10.1002/humu.20006.

DOI:10.1002/humu.20006
PMID:14974079
Abstract

Translocations and gross gene deletions are an important cause of both cancer and inherited disease. Such DNA rearrangements are nonrandomly distributed in the human genome as a consequence of selection for growth advantage and/or the inherent potential of some DNA sequences to be particularly susceptible to breakage and recombination. The Gross Rearrangement Breakpoint Database (GRaBD; http://www.uwcm.ac.uk/uwcm/mg/grabd/) was established primarily for the analysis of the sequence context of translocation and deletion breakpoints in a search for characteristics that might have rendered these sequences prone to rearrangement. GRaBD, which contains 397 germline and somatic DNA breakpoint junction sequences derived from 219 different rearrangements underlying human inherited disease and cancer, is the only comprehensive collection of gross gene rearrangement breakpoint junctions currently available.

摘要

易位和大片段基因缺失是癌症和遗传性疾病的重要病因。由于对生长优势的选择和/或某些DNA序列特别易发生断裂和重组的内在潜力,此类DNA重排在人类基因组中呈非随机分布。大片段重排断点数据库(GRaBD;http://www.uwcm.ac.uk/uwcm/mg/grabd/)主要用于分析易位和缺失断点的序列背景,以寻找可能使这些序列易于重排的特征。GRaBD包含397个种系和体细胞DNA断点连接序列,这些序列来自219种导致人类遗传性疾病和癌症的不同重排,是目前唯一全面的大片段基因重排断点连接序列集合。

相似文献

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Gross Rearrangement Breakpoint Database (GRaBD).基因重排断点数据库(GRaBD)
Hum Mutat. 2004 Mar;23(3):219-21. doi: 10.1002/humu.20006.
2
Translocation and gross deletion breakpoints in human inherited disease and cancer I: Nucleotide composition and recombination-associated motifs.人类遗传性疾病和癌症中的易位与大片段缺失断点I:核苷酸组成及与重组相关的基序
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Translocation and gross deletion breakpoints in human inherited disease and cancer II: Potential involvement of repetitive sequence elements in secondary structure formation between DNA ends.人类遗传疾病和癌症中的易位与大片段缺失断点II:重复序列元件在DNA末端间二级结构形成中的潜在作用
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Clinical and molecular characterization of a transmitted reciprocal translocation t(1;12)(p32.1;q21.3) in a family co-segregating with mental retardation, language delay, and microcephaly.一个家族中传递性相互易位 t(1;12)(p32.1;q21.3)的临床和分子特征,该家族共分离出精神发育迟滞、语言迟缓、小头畸形。
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