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胎儿弯曲菌分离株中sap同源物的保守性、多样性及其组织形式

Conservation and diversity of sap homologues and their organization among Campylobacter fetus isolates.

作者信息

Tu Zheng-Chao, Hui John, Blaser Martin J

机构信息

Departments of Medicine. Microbiology, New York University School of Medicine. Department of Veterans Affairs Medical Center, New York, New York 10016, USA.

出版信息

Infect Immun. 2004 Mar;72(3):1715-24. doi: 10.1128/IAI.72.3.1715-1724.2004.

DOI:10.1128/IAI.72.3.1715-1724.2004
PMID:14977980
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC356032/
Abstract

Campylobacter fetus surface layer proteins (SLPs), encoded by sapA homologues, are important in virulence. In wild-type C. fetus strain 23D, all eight sapA homologues are located in the 54-kb sap island, and SLP expression reflects the position of a unique sapA promoter in relation to the sapA homologues. The extensive homologies in the sap island include both direct and inverted repeats, which allow DNA rearrangements, deletion, or duplication; these elements confer substantial potential for genomic plasticity. To better understand C. fetus sap island diversity and variation mechanisms, we investigated the organization and distribution of sapA homologues among 18 C. fetus strains of different subspecies, serotypes, and origins. For all type A strains, the boundaries of the sap island were relatively consistent. A 187-bp noncoding DNA insertion near the upstream boundary of the sap island was found in two of three reptile strains studied. The sapA homologue profiles were strain specific, and six new sapA homologues were recognized. Several homologues from reptile strains are remarkably conserved in relation to their corresponding mammalian homologues. In total, the observed differences suggest that the sap island has evolved differing genotypes that are plastic, perhaps enabling colonization of varied niches, in addition to antigenic variation.

摘要

胎儿弯曲菌表面层蛋白(SLP)由sapA同源物编码,在毒力方面很重要。在野生型胎儿弯曲菌23D菌株中,所有八个sapA同源物都位于54 kb的sap岛中,SLP的表达反映了独特的sapA启动子相对于sapA同源物的位置。sap岛中的广泛同源性包括正向和反向重复序列,这允许DNA重排、缺失或复制;这些元件赋予了基因组可塑性的巨大潜力。为了更好地了解胎儿弯曲菌sap岛的多样性和变异机制,我们研究了18株不同亚种、血清型和来源的胎儿弯曲菌中sapA同源物的组织和分布。对于所有A型菌株,sap岛的边界相对一致。在所研究的三株爬行动物菌株中的两株中,在sap岛上游边界附近发现了一个187 bp的非编码DNA插入。sapA同源物谱是菌株特异性的,并且识别出六个新的sapA同源物。与相应的哺乳动物同源物相比,来自爬行动物菌株的几个同源物非常保守。总的来说,观察到的差异表明,除了抗原变异外,sap岛已经进化出不同的可塑性基因型,这可能使其能够在不同的生态位中定殖。

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1
Conservation and diversity of sap homologues and their organization among Campylobacter fetus isolates.胎儿弯曲菌分离株中sap同源物的保守性、多样性及其组织形式
Infect Immun. 2004 Mar;72(3):1715-24. doi: 10.1128/IAI.72.3.1715-1724.2004.
2
Structure and genotypic plasticity of the Campylobacter fetus sap locus.胎儿弯曲菌sap基因座的结构与基因型可塑性
Mol Microbiol. 2003 May;48(3):685-98. doi: 10.1046/j.1365-2958.2003.03463.x.
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A deletion in the sapA homologue cluster is responsible for the loss of the S-layer in Campylobacter fetus strain TK.胎儿弯曲杆菌TK菌株中S层的缺失是由sapA同源簇中的一个缺失所致。
Arch Microbiol. 1997 Apr;167(4):196-201. doi: 10.1007/s002030050435.
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Rearrangement of sapA homologs with conserved and variable regions in Campylobacter fetus.胎儿弯曲杆菌中具有保守和可变区域的sapA同源物的重排。
Proc Natl Acad Sci U S A. 1993 Aug 1;90(15):7265-9. doi: 10.1073/pnas.90.15.7265.
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Segmental conservation of sapA sequences in type B Campylobacter fetus cells.胎儿弯曲杆菌B型细胞中sapA序列的片段保守性。
J Biol Chem. 1995 Jun 23;270(25):15093-101. doi: 10.1074/jbc.270.25.15093.
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Characterization of the Campylobacter fetus sapA promoter: evidence that the sapA promoter is deleted in spontaneous mutant strains.胎儿弯曲杆菌sapA启动子的特征:自发突变菌株中sapA启动子缺失的证据。
J Bacteriol. 1992 Sep;174(18):5916-22. doi: 10.1128/jb.174.18.5916-5922.1992.
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High-frequency S-layer protein variation in Campylobacter fetus revealed by sapA mutagenesis.通过sapA诱变揭示胎儿弯曲杆菌高频S层蛋白变异
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Campylobacter fetus surface layer proteins are transported by a type I secretion system.胎儿弯曲杆菌表层蛋白通过I型分泌系统运输。
J Bacteriol. 1998 Dec;180(24):6450-8. doi: 10.1128/JB.180.24.6450-6458.1998.
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Protein shift and antigenic variation in the S-layer of Campylobacter fetus subsp. venerealis during bovine infection accompanied by genomic rearrangement of sapA homologs.胎儿弯曲杆菌性病亚种在牛感染期间S层中的蛋白质迁移和抗原变异,伴有sapA同源物的基因组重排。
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Evidence that the Campylobacter fetus sap locus is an ancient genomic constituent with origins before mammals and reptiles diverged.胎儿弯曲杆菌sap基因座是一种古老的基因组成分,其起源早于哺乳动物和爬行动物分化的证据。
Infect Immun. 2001 Apr;69(4):2237-44. doi: 10.1128/IAI.69.4.2237-2244.2001.

引用本文的文献

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J Clin Microbiol. 2010 Mar;48(3):977-80. doi: 10.1128/JCM.01439-09. Epub 2010 Jan 6.
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Genetic divergence of Campylobacter fetus strains of mammal and reptile origins.源自哺乳动物和爬行动物的胎儿弯曲杆菌菌株的遗传差异。
J Clin Microbiol. 2005 Jul;43(7):3334-40. doi: 10.1128/JCM.43.7.3334-3340.2005.
3
Campylobacter fetus of reptile origin as a human pathogen.源自爬行动物的胎儿弯曲杆菌作为一种人类病原体。
J Clin Microbiol. 2004 Sep;42(9):4405-7. doi: 10.1128/JCM.42.9.4405-4407.2004.

本文引用的文献

1
Structure and genotypic plasticity of the Campylobacter fetus sap locus.胎儿弯曲菌sap基因座的结构与基因型可塑性
Mol Microbiol. 2003 May;48(3):685-98. doi: 10.1046/j.1365-2958.2003.03463.x.
2
Epidemiology and antimicrobial susceptibilities of 111 Campylobacter fetus subsp. fetus strains isolated in Québec, Canada, from 1983 to 2000.1983年至2000年在加拿大魁北克分离出的111株胎儿弯曲菌胎儿亚种的流行病学及抗菌药敏情况
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Role of S-layer protein antigenic diversity in the immune responses of sheep experimentally challenged with Campylobacter fetus subsp. fetus.S层蛋白抗原多样性在经胎儿弯曲杆菌胎儿亚种实验性攻毒的绵羊免疫反应中的作用。
Infect Immun. 2003 Jan;71(1):147-54. doi: 10.1128/IAI.71.1.147-154.2003.
4
Campylobacter fetus uses multiple loci for DNA inversion within the 5' conserved regions of sap homologs.胎儿弯曲杆菌在sap同源物5'保守区域内利用多个基因座进行DNA倒位。
J Bacteriol. 2001 Nov;183(22):6654-61. doi: 10.1128/JB.183.22.6654-6661.2001.
5
Evidence that the Campylobacter fetus sap locus is an ancient genomic constituent with origins before mammals and reptiles diverged.胎儿弯曲杆菌sap基因座是一种古老的基因组成分,其起源早于哺乳动物和爬行动物分化的证据。
Infect Immun. 2001 Apr;69(4):2237-44. doi: 10.1128/IAI.69.4.2237-2244.2001.
6
Campylobacter fetus sap inversion occurs in the absence of RecA function.胎儿弯曲杆菌的鞭毛鞘倒位在RecA功能缺失的情况下发生。
Infect Immun. 2000 Oct;68(10):5663-7. doi: 10.1128/IAI.68.10.5663-5667.2000.
7
Roles of the surface layer proteins of Campylobacter fetus subsp. fetus in ovine abortion.胎儿弯曲杆菌胎儿亚种表面层蛋白在绵羊流产中的作用。
Infect Immun. 2000 Mar;68(3):1687-91. doi: 10.1128/IAI.68.3.1687-1691.2000.
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Bacterial S-layers.细菌表面层
Trends Microbiol. 1999 Jun;7(6):253-60. doi: 10.1016/s0966-842x(99)01513-9.
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Campylobacter fetus surface layer proteins are transported by a type I secretion system.胎儿弯曲杆菌表层蛋白通过I型分泌系统运输。
J Bacteriol. 1998 Dec;180(24):6450-8. doi: 10.1128/JB.180.24.6450-6458.1998.
10
Cloning of a sapB homologue (sapB2) encoding a putative 112-kDa Campylobacter fetus S-layer protein and its use for identification and molecular genotyping.
FEMS Immunol Med Microbiol. 1998 Aug;21(4):269-81. doi: 10.1111/j.1574-695X.1998.tb01174.x.