Searle Mark S
School of Chemistry, Centre for Biomolecular Sciences University of Nottingham, University Park, Nottingham NG7 2RD, United Kingdom.
Biopolymers. 2004;76(2):185-95. doi: 10.1002/bip.10577.
beta-Hairpin peptides (two anti-parallel strands linked by a reverse beta-turn) have emerged as the simplest systems for probing weak interactions in beta-sheet folding. We describe a model 16-residue hairpin system (peptide beta1: KKYTVSINGKKITVSI) designed around the anti-parallel beta-sheet DNA binding motif of the Met repressor dimer in which two beta-strand sequences are linked through an Asn-Gly type I' beta-turn. The peptide is significantly folded in aqueous solution and has a well-defined conformation as evident from an abundance of NOE data. We review a number of analogues of beta1 designed to estimate the energetic contribution of electrostatic (ion pairing) interactions to hairpin stability, to examine effects of cooperativity and preorganization in determining the energetics of weak interactions, and examine the effects on stability and conformation of incorporation of a three-histidine motif on one face of the hairpin capable of zinc complexation.
β-发夹肽(由反向β-转角连接的两条反平行链)已成为探测β-折叠中弱相互作用的最简单体系。我们描述了一个围绕Met阻遏物二聚体的反平行β-折叠DNA结合基序设计的16个残基的发夹模型体系(肽β1:KKYTVSINGKKITVSI),其中两条β-链序列通过Asn-Gly I'型β-转角连接。该肽在水溶液中显著折叠,并且从大量的NOE数据可以明显看出其具有明确的构象。我们综述了一些β1的类似物,这些类似物旨在评估静电(离子配对)相互作用对发夹稳定性的能量贡献,研究协同性和预组织在确定弱相互作用能量方面的影响,并考察在发夹的一个面上掺入能够与锌络合的三组氨酸基序对稳定性和构象的影响。