Phillips Nelson B, Nikolskaya Tatiana, Jancso-Radek Agnes, Ittah Varda, Jiang Fashun, Singh Rupinder, Haas Elisha, Weiss Michael A
Department of Biochemistry, School of Medicine, Case Western Reserve University, Cleveland, Ohio 44106-4935, USA.
Biochemistry. 2004 Jun 8;43(22):7066-81. doi: 10.1021/bi049920a.
The testis-determining factor SRY contains an HMG box DNA-bending domain. Human and murine factors (hSRY and mSRY, respectively) exhibit marked sequence divergence and are reported to differ markedly in DNA bending properties. Surprisingly, the combined application of time-resolved fluorescence resonance energy transfer (tr-FRET) and permutation gel electrophoresis demonstrates that the hSRY-DNA complex is more sharply bent than the murine complex and not less bent as previously reported. tr-FRET-based analyses of the distribution of end-to-end distances in the bent DNA-protein complexes further suggest that a broader range of DNA bend angles is populated in the murine ensemble than in the human ensemble. The two domains and their respective DNA complexes nevertheless exhibit similar thermodynamic stabilities. (1)H NMR spectra indicate analogous intercalation of distinct "cantilever" side chains (isoleucine or methionine) with subtle differences in induced DNA structure. Interchange of cantilevers does not affect DNA bending. That transgenic expression of either human or murine Sry in XX mice can confer a male somatic phenotype suggests that SRY-directed transcriptional regulation is robust to enhanced DNA bending and to changes in the precision of DNA bending. We propose that male-specific gene regulation requires DNA bending above a critical threshold set by architectural requirements of enhanceosome assembly.
睾丸决定因子SRY包含一个HMG盒DNA弯曲结构域。人类和小鼠的该因子(分别为hSRY和mSRY)表现出明显的序列差异,且据报道在DNA弯曲特性上也有显著不同。令人惊讶的是,时间分辨荧光共振能量转移(tr-FRET)和置换凝胶电泳的联合应用表明,hSRY-DNA复合物比小鼠复合物的弯曲程度更大,而不是像之前报道的那样弯曲程度更小。基于tr-FRET对弯曲的DNA-蛋白质复合物中端到端距离分布的分析进一步表明,小鼠复合物群体中的DNA弯曲角度范围比人类复合物群体更广。然而,这两个结构域及其各自的DNA复合物表现出相似的热力学稳定性。(1)H NMR光谱表明不同的“悬臂”侧链(异亮氨酸或甲硫氨酸)有类似的嵌入,在诱导的DNA结构上有细微差异。悬臂的互换并不影响DNA弯曲。XX小鼠中人类或小鼠Sry的转基因表达都能赋予雄性体细胞表型,这表明SRY指导的转录调控对增强的DNA弯曲和DNA弯曲精度的变化具有很强的抗性。我们提出,雄性特异性基因调控需要DNA弯曲超过增强子体组装的结构要求所设定的临界阈值。