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通过X射线衍射和计算机晶体结构预测对百菌清复杂新多晶型物的表征

Characterization of complicated new polymorphs of chlorothalonil by X-ray diffraction and computer crystal structure prediction.

作者信息

Tremayne Maryjane, Grice Leanne, Pyatt James C, Seaton Colin C, Kariuki Benson M, Tsui Helen H Y, Price Sarah L, Cherryman Julian C

机构信息

School of Chemistry, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.

出版信息

J Am Chem Soc. 2004 Jun 9;126(22):7071-81. doi: 10.1021/ja0498235.

Abstract

A simultaneous experimental and computational search for polymorphs of chlorothalonil (2,4,5,6-tetrachloro-1,3-benzenedicarbonitrile) has been conducted, leading to the first characterization of forms 2 and 3. The crystal structure prediction study, using a specifically developed anisotropic atom-atom potential for chlorothalonil, gave as the global minimum in the lattice energy a structure that was readily refined against powder diffraction data to the known form 1 (P2(1)/a). The structure of form 2 was solved and refined from powder diffraction data, giving a disordered structure in the Rm (166) space group (Z = 3). It could also be refined against a P1 ordered model, starting from a low-energy hypothetical sheet structure found in the computational search. This shows that the disorder could be associated with the stacking of ordered sheets. The disordered structure for form 2 was later confirmed by single-crystal X-ray diffraction. The structure of form 3, determined from single-crystal diffraction, contains three independent molecules in the asymmetric unit in P2(1) (4) (Z = 6). Powder diffraction showed that this single-herringbone structure was similar to two low-energy structures found in the search. Further analysis confirmed that form 3 has a similar lattice energy and contains elements from both these predicted structures, which can be considered as good approximations to the form 3 structure.

摘要

对百菌清(2,4,5,6-四氯-1,3-苯二甲腈)的多晶型物进行了同步实验和计算搜索,首次对晶型2和晶型3进行了表征。晶体结构预测研究使用了专门为百菌清开发的各向异性原子-原子势,在晶格能量方面给出了一个全局最小值结构,该结构很容易根据粉末衍射数据精修至已知的晶型1(P2(1)/a)。晶型2的结构通过粉末衍射数据解析和精修,得到了一个在Rm(166)空间群(Z = 3)中的无序结构。从计算搜索中找到的低能量假设片状结构开始,它也可以根据P1有序模型进行精修。这表明无序可能与有序片层的堆积有关。晶型2的无序结构后来通过单晶X射线衍射得到证实。由单晶衍射确定的晶型3的结构在P2(1)(4)空间群(Z = 6)的不对称单元中包含三个独立分子。粉末衍射表明这种单人字结构与搜索中发现的两个低能量结构相似。进一步分析证实晶型3具有相似的晶格能量,并且包含这两个预测结构的元素,可以认为是晶型3结构的良好近似。

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