BioPD：一个基于网络的生物活性肽信息中心。

BioPD: a web-based information center for bioactive peptides.

作者信息

Shi Lei, Zhang Qipeng, Rui Wei, Lu Ming, Jing Xia, Shang Tong, Tang Jian

机构信息

Institute of Cardiovascular Science, Peking University Health Science Center, Xueyuan Road 38, Beijing 100083, PR China.

出版信息

Regul Pept. 2004 Aug 15;120(1-3):1-3. doi: 10.1016/j.regpep.2004.03.002.

DOI:10.1016/j.regpep.2004.03.002

PMID:15177914

Abstract

Bioactive peptide database (BioPD) is a web-based knowledge base that contains more than 1100 protein sequences from human, mouse and rat, which are putative or are known to be bioactive peptides. In addition to peptide sequences and the annotation, the database also contains gene sequences with annotation, protein interaction and disease data related to the peptides. Each entry has as many references as possible to support the information represented. BioPD consists of six parts: PROTEIN, GENE, DISEASE, LINKS, INTERACTION, and REFERENCE. The database is searchable through keyword, gene and protein name, receptor name, etc. The links to PDB, InterPro, Pfam, OMIM, etc. are provided in each entry. Thus BioPD is formed as an information center for the bioactive peptide and serves as a gateway for exploration of bioactive peptides. The database can be accessed at http://biopd.bjmu.edu.cn.

摘要

生物活性肽数据库（BioPD）是一个基于网络的知识库，包含来自人类、小鼠和大鼠的1100多条蛋白质序列，这些序列是推测的或已知的生物活性肽。除了肽序列和注释外，该数据库还包含带有注释的基因序列、与这些肽相关的蛋白质相互作用和疾病数据。每个条目都有尽可能多的参考文献来支持所呈现的信息。BioPD由六个部分组成：蛋白质、基因、疾病、链接、相互作用和参考文献。该数据库可通过关键词、基因和蛋白质名称、受体名称等进行搜索。每个条目中都提供了到PDB、InterPro、Pfam、OMIM等的链接。因此，BioPD形成了一个生物活性肽的信息中心，并作为探索生物活性肽的门户。该数据库可通过http://biopd.bjmu.edu.cn访问。