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谷氨酸棒杆菌中与抑制剂相关的转座事件。

Inhibitor-associated transposition events in Corynebacterium glutamicum.

作者信息

Garbe T R, Suzuki N, Inui M, Yukawa H

机构信息

Research Institute of Innovative Technology for the Earth (RITE), 9-2, Kizugawadai, 619-0292, Kizu-cho, Kyoto, Japan.

出版信息

Mol Genet Genomics. 2004 Jul;271(6):729-41. doi: 10.1007/s00438-004-1026-4. Epub 2004 Jun 18.

Abstract

In up to 100% of all bacteria grown in the presence of initially inhibitory concentrations of five diverse inhibitors, an extra copy of the resident insertion element IS 31831 was found in specific chromosomal regions, the sites of which apparently depended on the inhibitor used. Thus, in nine out of nine independently isolated cyanide-associated transpositions, the acquired copy was located within an ORF encoding a protein related to the hypothetical but conserved protein YeiH of Escherichia coli. A putative Sox box upstream of the yeiH gene implicates superoxide as a potential regulator of the gene, a possibility further supported by the finding that superoxide dismutase (SodA) is overexpressed in cells cultured in cyanide-containing medium. Neither the cyanide-associated nor any of the other transposition mutations appeared to confer any discernible phenotypic advantage upon cells grown in the presence or absence of the inhibitors, as revealed most stringently by mixed-cell experiments. An alternative, albeit heterodox, explanation for the emergence of the mutants postulates a very high rate of transpositional activity in the presence of inhibitors. The initial emergence of the mutants was found to depend crucially upon the cell density. Thus, when growth medium was supplemented with 50 mM fluoropyruvate and inoculated to a density of 2 x 10(7) cfu/ml, single colonies with heterogeneous restriction fragment length polymorphisms (RFLPs) were routinely isolated at a frequency of 6 to 16% after 1-2 days of incubation. After 3 days, 10-36% of the colonies showed RFLPs, but the type was now dominated by the fluoropyruvate-specific RFLP, which, at higher resolution, invariably proved to be heterogeneous. This heterogeneity proved that these specific mutants were of multiple origin, indicating that clonal enrichment was irrelevant to their emergence. It is suggested that the presence of the inhibitor induces the development of hyper-transpositional activity, which is regulated by a soluble bacterial product.

摘要

在最初处于抑制浓度的五种不同抑制剂存在的情况下培养的所有细菌中,高达100%的细菌在特定染色体区域发现了常驻插入元件IS 31831的额外拷贝,其位置显然取决于所使用的抑制剂。因此,在九个独立分离的与氰化物相关的转座事件中,获得的拷贝位于一个开放阅读框内,该开放阅读框编码一种与大肠杆菌假设但保守蛋白YeiH相关的蛋白。yeiH基因上游的一个假定的Sox框表明超氧化物可能是该基因的潜在调节因子,超氧化物歧化酶(SodA)在含氰化物培养基中培养的细胞中过表达这一发现进一步支持了这一可能性。混合细胞实验最严格地表明,与氰化物相关的转座突变以及任何其他转座突变似乎都没有赋予在有或没有抑制剂的情况下生长的细胞任何明显的表型优势。对突变体出现的另一种解释,尽管有些异端,假定在抑制剂存在的情况下转座活性非常高。发现突变体的最初出现关键取决于细胞密度。因此,当生长培养基补充50 mM氟丙酮酸并接种至密度为2×10⁷ cfu/ml时,在培养1 - 2天后,通常以6%至16%的频率分离出具有异质限制性片段长度多态性(RFLP)的单菌落。3天后,10% - 36%的菌落显示出RFLP,但此时类型以氟丙酮酸特异性RFLP为主,在更高分辨率下,它总是被证明是异质的。这种异质性证明这些特定突变体有多个起源,表明克隆富集与它们的出现无关。有人认为抑制剂的存在诱导了超转座活性的发展,这种活性由一种可溶性细菌产物调节。

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