Schlegel Laurent, Grimont Francine, Grimont Patrick A, Bouvet Anne
Centre National de Référence des Streptocoques, Service de Microbiologie, Hôtel Dieu AP-HP, Université Paris V & Unité Biodiversité des Bactéries Pathogènes Emergentes, INSERM U389, Institut Pasteur, Paris, France.
Indian J Med Res. 2004 May;119 Suppl:252-6.
BACKGROUND & OBJECTIVES: The heterogeneity of group D streptococci led to the identification of various biotypes of Streptococcus equinus and Streptococcus bovis and to the description of new species. The objective of the present study was to improve the phenotypic delineation between species and to clarify their respective phylogenetic position.
Physiological and genomic analyses were carried out in 84 representative strains of the group D streptococci. Biotypes were determined with the API 20 strep and rapid ID 32 STREP systems of identification. Quantitative DNA-DNA hybridization under stringent conditions and values of the deltaT(m) allowed to delineate species and subspecies. The phylogenic position of the different genomic groups was determined by comparing the sequences of their 16S rDNA.
Four DNA-clusters, including seven species or subspecies, were characterized. Differential associations of biochemical characters allowed their identification. S. equinus and the type strain of S. bovis belonged to a single species. S. gallolyticus, S. bovis biotype II.2, and S. macedonicus formed a single DNA-cluster including three different subspecies. These were designated as S. gallolyticus subsp. gallolyticus, S. gallolyticus subsp. pasteurianus, and S. gallolyticus subsp. macedonicus. The two other DNA-clusters corresponded to the two subspecies of S. infantarius, and to S. alactolyticus.
INTERPRETATION & CONCLUSION: This study presented a new classification associated with an identification scheme of group D streptococci. The changes in this classification demonstrate the interest of a polyphagic approach of the bacterial identification.
D群链球菌的异质性导致了马肠链球菌和牛链球菌不同生物型的鉴定以及新物种的描述。本研究的目的是改进物种间的表型划分并阐明它们各自的系统发育位置。
对84株D群链球菌的代表性菌株进行了生理和基因组分析。使用API 20 strep和快速ID 32 STREP鉴定系统确定生物型。在严格条件下进行定量DNA-DNA杂交以及ΔT(m)值用于划分物种和亚种。通过比较不同基因组群的16S rDNA序列确定其系统发育位置。
鉴定出四个DNA簇,包括七个物种或亚种。生化特征的不同组合有助于它们的鉴定。马肠链球菌和牛链球菌的模式菌株属于同一个物种。解脲链球菌、牛链球菌生物型II.2和马其顿链球菌形成一个单一的DNA簇,包括三个不同的亚种。这些被指定为解脲链球菌解脲亚种、解脲链球菌巴斯德亚种和解脲链球菌马其顿亚种。另外两个DNA簇分别对应婴儿链球菌的两个亚种和非解乳糖链球菌。
本研究提出了一种与D群链球菌鉴定方案相关的新分类。这种分类的变化表明了采用多相方法进行细菌鉴定的意义。