Ramachandran Sekar, Cerione Richard A
Department of Molecular Medicine, Cornell University, Ithaca, New York 14853, USA.
Biochemistry. 2004 Jul 13;43(27):8778-86. doi: 10.1021/bi0362774.
The GTP-binding protein (G protein), transducin, serves as a key molecular switch in vertebrate vision through the tight regulation of its GTP-binding (activation)/GTP hydrolytic (deactivation) cycle by the photoreceptor rhodopsin. To better understand the structure-function characteristics of transducin activation, we have set out to identify spectroscopic probes that bind to the guanine nucleotide-binding site of this G protein and maintain its ability to interact with its specific cellular target/effector, the cyclic GMP phosphodiesterase (PDE). In this study, we describe the characterization of a fluorescently labeled GTP analogue, BODIPY-FL GTPgammaS (BOD-GTPgammaS), that binds to the alpha subunit of transducin (alpha(T)) in a rhodopsin- and Gbetagamma-dependent manner, similar to the binding of GTP or GTPgammaS, with an apparent dissociation constant of 100 nM. The rhodopsin-dependent binding of BOD-GTPgammaS to alpha(T) is slow, relative to the rate of binding of GTPgammaS, particularly under conditions where rhodopsin must act catalytically to stimulate the exchange of BOD-GTPgammaS for GDP on multiple alpha(T) subunits. This reflects a slower rate of dissociation of rhodopsin and Gbetagamma from alpha(T)-BOD-GTPgammaS complexes, relative to their rates of dissociation from alpha(T)-GTPgammaS. The binding of BOD-GTPgammaS occurs without a change in the intrinsic tryptophan fluorescence of alpha(T), indicating that only a subtle movement of the Switch 2 domain on alpha(T) accompanies the binding of this GTPgammaS analogue. Nevertheless, the BOD-GTPgammaS-bound alpha(T) subunit is able to bind with high affinity to the recombinant, purified gamma subunit of PDE (gamma(PDE)) labeled with 5-((((2-iodoacetyl)amino)ethyl)amino)naphthalene-1-sulfonic acid (IAEDANS (K(d) approximately 13 nM)), as well as bind to and stimulate the activity of PDE, albeit less efficiently compared to alpha(T)-GTPgammaS. Taken together, these findings suggest that the binding of BOD-GTPgammaS to transducin causes it to adopt a distinct conformation that appears to be intermediate between the inactive and fully active states of alpha(T), and this fluorescent nucleotide analogue can be used as a reporter group to characterize the interactions of alpha(T) in this conformational state with its biological target/effector.
GTP结合蛋白(G蛋白)转导素是脊椎动物视觉中的关键分子开关,通过光感受器视紫红质对其GTP结合(激活)/GTP水解(失活)循环的严格调控来发挥作用。为了更好地理解转导素激活的结构 - 功能特性,我们着手鉴定能与该G蛋白的鸟嘌呤核苷酸结合位点结合并保持其与特定细胞靶点/效应物——环磷酸鸟苷磷酸二酯酶(PDE)相互作用能力的光谱探针。在本研究中,我们描述了一种荧光标记的GTP类似物BODIPY - FL GTPγS(BOD - GTPγS)的特性,它以视紫红质和Gβγ依赖的方式与转导素的α亚基(α(T))结合,类似于GTP或GTPγS的结合,表观解离常数为100 nM。相对于GTPγS的结合速率,BOD - GTPγS与α(T)的视紫红质依赖结合较慢,特别是在视紫红质必须催化刺激多个α(T)亚基上的BOD - GTPγS与GDP交换的条件下。这反映出视紫红质和Gβγ从α(T) - BOD - GTPγS复合物中的解离速率相对于它们从α(T) - GTPγS中的解离速率较慢。BOD - GTPγS结合时α(T)的内在色氨酸荧光没有变化,表明只有α(T)上的开关2结构域有细微移动伴随这种GTPγS类似物的结合。然而,结合了BOD - GTPγS的α(T)亚基能够与用5 -((((2 - 碘乙酰基)氨基)乙基)氨基)萘 - 1 - 磺酸(IAEDANS,K(d)约为13 nM)标记的重组纯化的PDEγ亚基(γ(PDE))高亲和力结合,并且能结合并刺激PDE的活性,尽管与α(T) - GTPγS相比效率较低。综上所述,这些发现表明BOD - GTPγS与转导素的结合使其呈现出一种独特的构象,该构象似乎介于α(T)的无活性和完全活性状态之间,并且这种荧光核苷酸类似物可作为报告基团来表征处于这种构象状态的α(T)与其生物靶点/效应物之间的相互作用。