Izquierdo Sandra, Kogan Marcelo J, Parella Teodor, Moglioni Albertina G, Branchadell Vicenç, Giralt Ernest, Ortuño Rosa M
Departament de Química, Universitat Autonoma de Barcelona, 08193 Bellaterra, Barcelona, Spain.
J Org Chem. 2004 Jul 23;69(15):5093-9. doi: 10.1021/jo0497555.
The efficient synthesis of tetrapeptide 5 containing, in alternation, cyclobutane and beta-alanine residues is described. NMR experiments both at low temperature in CDCl(3) and at 298 K in DMSO-d(6) solutions show the contribution of a strong hydrogen bond in the folded major conformation of 5. Temperature coefficients and diffusion times point out a hydrogen bond involving the NH proton from the cyclobutane residue 1 whereas NOEs manifest the high rigidity of the central fragment of the molecule and are compatible with a 14-membered macrocycle. Theoretical calculations predict a most stable folded conformation corresponding to a 14-helix stabilized by a hydrogen bond between NH(10) in the first residue and OC(25) in the third residue. This structure remains unaltered during the molecular dynamics simulation at 298 K in chloroform. All these results provide evidence for a 14-helical folding and reveal the ability of cis-2-aminocyclobutane carboxylic acid residues to promote folded conformations when incorporated into beta-peptides.
本文描述了交替含有环丁烷和β-丙氨酸残基的四肽5的高效合成方法。在CDCl₃中低温以及在DMSO-d₆溶液中298K下进行的核磁共振实验表明,在5的折叠主要构象中存在强氢键的作用。温度系数和扩散时间表明,氢键涉及环丁烷残基1的NH质子,而核Overhauser效应(NOE)表明分子中心片段具有高刚性,且与一个14元大环结构相符。理论计算预测,最稳定的折叠构象对应于一个14螺旋结构,该结构通过第一个残基中的NH(10)与第三个残基中的OC(25)之间的氢键得以稳定。在298K氯仿中的分子动力学模拟过程中,该结构保持不变。所有这些结果都为14螺旋折叠提供了证据,并揭示了顺式-2-氨基环丁烷羧酸残基在掺入β-肽时促进折叠构象的能力。