Bhatt Anant Narayan, Khan M Yahiya, Bhakuni Vinod
Division of Molecular and Structural Biology, Central Drug Research Institute, Lucknow 226 001, India.
Protein Sci. 2004 Aug;13(8):2184-95. doi: 10.1110/ps.04769004.
The serine hydroxymethyltransferase from Bacillus subtilis (bsSHMT) and B. stearothermophilus (bstSHMT) are both homodimers and share approximately 77% sequence identity; however, they show very different thermal stabilities and unfolding pathways. For investigating the role of N- and C-terminal domains in stability and unfolding of dimeric SHMTs, we have swapped the structural domains between bs- and bstSHMT and generated the two novel chimeric proteins bsbstc and bstbsc, respectively. The chimeras had secondary structure, tyrosine, and pyridoxal-5'-phosphate microenvironment similar to that of the wild-type proteins. The chimeras showed enzymatic activity slightly higher than that of the wild-type proteins. Interestingly, the guanidium chloride (GdmCl)-induced unfolding showed that unlike the wild-type bsSHMT, which undergoes dissociation of native dimer into monomers at low guanidium chloride (GdmCl) concentration, resulting in a non-cooperative unfolding of enzyme, its chimera bsbstc, having the C-terminal domain of bstSHMT was resistant to low GdmCl concentration and showed a GdmCl-induced cooperative unfolding from native dimer to unfolded monomer. In contrast, the wild-type dimeric bstSHMT was resistant to low GdmCl concentration and showed a GdmCl-induced cooperative unfolding, whereas its chimera bstbsc, having the C- terminal domain of bsSHMT, showed dissociation of native dimer into monomer at low GdmCl concentration and a GdmCl-induced non-cooperative unfolding. These results clearly demonstrate that the C-terminal domain of dimeric SHMT plays a vital role in stabilization of the oligomeric structure of the native enzyme hence modulating its unfolding pathway.
来自枯草芽孢杆菌的丝氨酸羟甲基转移酶(bsSHMT)和嗜热脂肪芽孢杆菌的丝氨酸羟甲基转移酶(bstSHMT)均为同型二聚体,序列同一性约为77%;然而,它们表现出非常不同的热稳定性和去折叠途径。为了研究N端和C端结构域在二聚体SHMT稳定性和去折叠中的作用,我们在bsSHMT和bstSHMT之间交换了结构域,分别产生了两种新型嵌合蛋白bsbstc和bstbsc。嵌合体具有与野生型蛋白相似的二级结构、酪氨酸和磷酸吡哆醛-5'-磷酸微环境。嵌合体的酶活性略高于野生型蛋白。有趣的是,氯化胍(GdmCl)诱导的去折叠表明,与野生型bsSHMT不同,野生型bsSHMT在低氯化胍(GdmCl)浓度下天然二聚体解离为单体,导致酶的非协同去折叠,其嵌合体bsbstc具有bstSHMT的C端结构域,对低GdmCl浓度具有抗性,并显示出GdmCl诱导的从天然二聚体到去折叠单体的协同去折叠。相反,野生型二聚体bstSHMT对低GdmCl浓度具有抗性,并显示出GdmCl诱导的协同去折叠,而其嵌合体bstbsc具有bsSHMT的C端结构域,在低GdmCl浓度下天然二聚体解离为单体,并显示出GdmCl诱导的非协同去折叠。这些结果清楚地表明,二聚体SHMT的C端结构域在稳定天然酶的寡聚结构从而调节其去折叠途径中起着至关重要的作用。