le Du M H, Housset D, Marchot P, Bougis P E, Navaza J, Fontecilla-Camps J C
Laboratoire de Cristallographie et Cristallogenèse des Protéines, Institut de Biologie Structurale J.P. Ebel, CEA-CNRS, Grenoble, France.
Acta Crystallogr D Biol Crystallogr. 1996 Jan 1;52(Pt 1):87-92. doi: 10.1107/S0907444995007517.
The crystal structure of the snake toxin fasciculin 2, a potent acetylcholinesterase inhibitor from the venom of the green mamba (Dendroaspis angusticeps), has been determined by the molecular-replacement method, using the fasciculin 1 model and refined to 2.0 A resolution. The introduction of an overall anisotropic temperature factor improved significantly the quality of the electron-density map. It suggests, as it was also indicated by the packing, that the thermal motion along the unique axis direction is less pronounced than on the (ab) plane. The final crystallographic R factor is 0.188 for a model having r.m.s. deviations from ideality of 0.016 A for bond lengths and 2.01 degrees for bond angles. As fasciculin 1, fasciculin 2 belongs to the three-finger class of Elapidae toxins, a structural group that also contains the alpha-neurotoxins and the cardiotoxins. Although the two fasciculins have, overall, closely related structures, the conformation of loop I differs appreciably in the two molecules. The presence of detergent in crystallization medium in the case of fasciculin 2 appears to be responsible for the displacement of the loop containing Thr9. This conformational change also results in the formation of a crystallographic dimer that displays extensive intermolecular interactions.
绿曼巴蛇(Dendroaspis angusticeps)毒液中一种强效乙酰胆碱酯酶抑制剂——蛇毒素束丝菌素2的晶体结构,已通过分子置换法,以束丝菌素1模型为基础测定,并精修至2.0埃分辨率。引入整体各向异性温度因子显著提高了电子密度图的质量。正如堆积情况所表明的那样,这表明沿唯一轴方向的热运动不如在(ab)平面上那么明显。对于一个键长与理想值的均方根偏差为0.016埃、键角为2.01度的模型,最终晶体学R因子为0.188。与束丝菌素1一样,束丝菌素2属于眼镜蛇科毒素的三指类,该结构组还包括α-神经毒素和心脏毒素。尽管这两种束丝菌素总体结构密切相关,但两个分子中环I的构象明显不同。在束丝菌素2的结晶介质中存在去污剂似乎是导致含有苏氨酸9的环发生位移的原因。这种构象变化还导致形成了一个晶体学二聚体,该二聚体表现出广泛的分子间相互作用。