Kaplan Daniel L, O'Donnell Mike
Rockefeller University, New York, NY 10021, USA.
Mol Cell. 2004 Aug 13;15(3):453-65. doi: 10.1016/j.molcel.2004.06.039.
DnaB is the primary replicative helicase in Escherichia coli. We show here that DnaB can unwind two duplex arms simultaneously for an extended distance provided that two protein rings are positioned on opposite sides of the duplex arms. A putative eukaryotic replication fork helicase, Mcm4,6,7, performs a similar activity. Double-ringed melting of duplexes may function at a replication fork in vivo. This mechanism may apply to RuvB, since the proteins share mechanistic similarities. Thus, two RuvB hexamers may function in coordination at a Holliday junction to overcome regions of DNA heterology and DNA lesions. Furthermore, DnaB can actively translocate along DNA while encircling three DNA strands. Therefore, if DnaB encounters a D loop during fork progression, it will encircle the invading strand and may convert the recombinative invading strand to a daughter lagging strand. Finally, we present evidence that the DNA binding site of DnaB is buried inside its central channel.
DnaB是大肠杆菌中的主要复制解旋酶。我们在此表明,只要两个蛋白质环位于双链臂的相对两侧,DnaB就能同时解开两条双链臂并延伸一段距离。一种假定的真核生物复制叉解旋酶Mcm4、6、7也具有类似的活性。双链的双环解旋可能在体内的复制叉处发挥作用。这种机制可能适用于RuvB,因为这些蛋白质具有相似的机制。因此,两个RuvB六聚体可能在霍利迪连接点协同发挥作用,以克服DNA异源区域和DNA损伤。此外,DnaB在环绕三条DNA链的同时能沿着DNA主动移位。因此,如果DnaB在复制叉前进过程中遇到D环,它将环绕侵入链,并可能将重组侵入链转化为子链后随链。最后,我们提供证据表明DnaB的DNA结合位点埋藏在其中心通道内。