Clark Douglas S
Department of Chemical Engineering, University of California, Berkeley, CA 94720, USA.
Philos Trans R Soc Lond B Biol Sci. 2004 Aug 29;359(1448):1299-307; discussion 1307, 1323-8. doi: 10.1098/rstb.2004.1506.
We have examined enzymes in nearly anhydrous organic solvents spanning a wide range of dielectric constants using a combination of electron paramagnetic resonance (EPR) spectroscopy, molecular dynamics simulations, high-pressure kinetic studies and the electrostatic model of Kirkwood. This approach enabled us to investigate the relationship between catalytic activity, protein flexibility and solvent polarity for an enzymatic reaction proceeding through a highly polar transition state in the near absence of water. Further insights into water-protein interactions and the involvement of water in enzyme structure and function have been obtained by EPR and multinuclear nuclear magnetic resonance studies of enzymes suspended and immobilized in organic solvents with and without added water. In these systems, correlations were observed between the water content and enzyme activity, flexibility, and active-site polarity, although the structural properties of suspended and immobilized enzymes differed markedly. These results have helped to elucidate the role of water in molecular events at the enzymic active site leading to improved biocatalysis in low-water environments.
我们使用电子顺磁共振(EPR)光谱、分子动力学模拟、高压动力学研究以及柯克伍德静电模型相结合的方法,研究了处于各种介电常数的近无水有机溶剂中的酶。这种方法使我们能够研究在几乎没有水的情况下,通过高极性过渡态进行的酶促反应中催化活性、蛋白质柔韧性和溶剂极性之间的关系。通过对悬浮和固定在添加或不添加水的有机溶剂中的酶进行EPR和多核磁共振研究,我们进一步深入了解了水与蛋白质的相互作用以及水在酶结构和功能中的作用。在这些系统中,尽管悬浮酶和固定化酶的结构性质有显著差异,但观察到了水含量与酶活性、柔韧性和活性位点极性之间的相关性。这些结果有助于阐明水在酶活性位点分子事件中的作用,从而在低水环境中实现更好的生物催化。