Takahashi Hideaki, Matubayasi Nobuyuki, Nakahara Masaru, Nitta Tomoshige
Division of Chemical Engineering, Department of Materials Engineering Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan.
J Chem Phys. 2004 Sep 1;121(9):3989-99. doi: 10.1063/1.1774981.
A methodology has been proposed to compute the solvation free energy of a molecule described quantum chemically by means of quantum mechanical/molecular mechanical method combined with the theory of energy representation (QM/MM-ER). The present approximate approach is quite simple to implement and requires much less computational cost as compared with the free energy perturbation or thermodynamic integration. Furthermore, the electron distribution can be treated faithfully as a quantum chemical object, and it is no longer needed to employ the artificial interaction site model, a reduced form of the realistic electron distribution, which is commonly used in the conventional solution theory. The point of the present approach is to employ the QM solute with electron density fixed at its average distribution in order to make the solute-solvent interaction pairwise. Then, the solvation free energy can be computed within the standard framework of the energy representation. The remaining minor contribution originating from the many-body effect inherent in the quantum mechanical description can be evaluated separately within a similar framework if necessary. As a test calculation, the method has been applied to a QM water solute solvated by MM water solvent in ambient and supercritical states. The results of the QM/MM-ER simulations have been in excellent agreement with the experimental values.
有人提出了一种方法,用于计算通过量子力学/分子力学方法结合能量表示理论(QM/MM-ER)进行量子化学描述的分子的溶剂化自由能。与自由能微扰或热力学积分相比,目前的近似方法实施起来相当简单,并且计算成本要低得多。此外,电子分布可以如实地作为量子化学对象来处理,不再需要采用传统溶液理论中常用的人工相互作用位点模型,即现实电子分布的简化形式。本方法的要点是采用电子密度固定在其平均分布的量子力学溶质,以使溶质-溶剂相互作用成对。然后,可以在能量表示的标准框架内计算溶剂化自由能。如果需要,源于量子力学描述中固有的多体效应的其余微小贡献可以在类似框架内单独评估。作为测试计算,该方法已应用于在环境和超临界状态下由分子力学水溶剂溶剂化的量子力学水溶质。QM/MM-ER模拟的结果与实验值非常吻合。