Konishi Kazunobu, Ishida Kyoko, Oinuma Ken-Ichi, Ohta Takehiro, Hashimoto Yoshiteru, Higashibata Hiroki, Kitagawa Teizo, Kobayashi Michihiko
Institute of Applied Biochemistry, and Graduate School of Life and Environmental Sciences, The University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8572, Japan.
J Biol Chem. 2004 Nov 12;279(46):47619-25. doi: 10.1074/jbc.M407223200. Epub 2004 Aug 31.
Aldoxime dehydratase (OxdA), which is a novel heme protein, catalyzes the dehydration of an aldoxime to a nitrile even in the presence of water in the reaction mixture. The combination of site-directed mutagenesis of OxdA (mutation of all conserved histidines in the aldoxime dehydratase superfamily), estimation of the heme contents and specific activities of the mutants, and CD and resonance Raman spectroscopic analyses led to the identification of the proximal and distal histidines in this unique enzyme. The heme contents and CD spectra in the far-UV region of all mutants except for the H299A one were almost identical to those of the wild-type OxdA, whereas the H299A mutant lost the ability of binding heme, demonstrating that His(299) is the proximal histidine. On the other hand, substitution of alanine for His(320) did not affect the overall structure of OxdA but caused loss of its ability of carbon-nitrogen triple bond synthesis and a lower shift of the Fe-C stretching band in the resonance Raman spectrum for the CO-bound form. Furthermore, the pH dependence of the wild-type OxdA closely followed the His protonation curves observed for other proteins. These findings suggest that His(320) is located in the distal heme pocket of OxdA and would donate a proton to the substrate in the aldoxime dehydration mechanism.
醛肟脱水酶(OxdA)是一种新型血红素蛋白,即使反应混合物中存在水,它也能催化醛肟脱水生成腈。通过对OxdA进行定点诱变(醛肟脱水酶超家族中所有保守组氨酸的突变)、对突变体的血红素含量和比活性进行评估以及进行圆二色光谱(CD)和共振拉曼光谱分析,确定了这种独特酶中的近端和远端组氨酸。除H299A突变体之外,所有突变体在远紫外区域的血红素含量和CD光谱几乎与野生型OxdA相同,而H299A突变体失去了结合血红素的能力,这表明His(299)是近端组氨酸。另一方面,用丙氨酸取代His(320)并不影响OxdA的整体结构,但导致其碳氮三键合成能力丧失,并且在CO结合形式的共振拉曼光谱中Fe-C伸缩带发生较低的位移。此外,野生型OxdA的pH依赖性与其他蛋白质中观察到的组氨酸质子化曲线密切相关。这些发现表明His(320)位于OxdA的远端血红素口袋中,并且在醛肟脱水机制中会向底物提供一个质子。