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牙龈卟啉单胞菌二肽基肽酶IV的表达、纯化及初步晶体学分析

Expression, purification and preliminary crystallographic analysis of dipeptidyl peptidase IV from Porphyromonas gingivalis.

作者信息

Rea Dean, Lambeir Anne Marie, Kumagai Yumi, De Meester Ingrid, Scharpé Simon, Fülöp Vilmos

机构信息

Department of Biological Sciences, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, England.

出版信息

Acta Crystallogr D Biol Crystallogr. 2004 Oct;60(Pt 10):1871-3. doi: 10.1107/S0907444904017639. Epub 2004 Sep 23.

Abstract

The asaccharolytic periodontopathogen Porphyromonas gingivalis produces membrane-anchored proteases such as dipeptidyl peptidase IV that are involved in the destruction of host periodontal tissue. The extracellular domain of this enzyme was overexpressed in Escherichia coli as an N-terminal His-tag fusion protein, purified using standard metal-affinity chromatography and crystallized using the hanging-drop vapour-diffusion technique in 40% 2-methyl-2,4-pentanediol and 100 mM Tris-HCl pH 8.0. Diffraction data to 2.7 A resolution were collected using synchrotron radiation. The crystals belong to space group P2(1), with unit-cell parameters a = 117.0, b = 112.9, c = 310.0 A, beta = 95.0 degrees. There are ten molecules per asymmetric unit, indicating a solvent content of 50%. Data were also collected from selenomethionine-derived crystals and structure solution by SAD or MAD is in progress.

摘要

不产糖解的牙周病原体牙龈卟啉单胞菌可产生膜锚定蛋白酶,如二肽基肽酶IV,这些酶参与宿主牙周组织的破坏。该酶的胞外结构域在大肠杆菌中作为N端His标签融合蛋白进行过表达,使用标准金属亲和层析进行纯化,并采用悬滴气相扩散技术在40% 2-甲基-2,4-戊二醇和100 mM Tris-HCl pH 8.0中进行结晶。利用同步辐射收集了分辨率为2.7 Å的衍射数据。晶体属于空间群P2(1),晶胞参数a = 117.0、b = 112.9、c = 310.0 Å,β = 95.0°。每个不对称单元中有十个分子,溶剂含量为50%。还从硒代甲硫氨酸衍生的晶体中收集了数据,目前正在通过单波长反常散射或多波长反常散射进行结构解析。

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