Naseem Farah, Khan Rizwan Hasan
Interdisciplinary Biotechnology Unit, Aligarh Muslim University, Aligarh 202002, India.
Arch Biochem Biophys. 2004 Nov 15;431(2):215-23. doi: 10.1016/j.abb.2004.07.029.
An intermediate state of lentil lectin was characterized at pH 1 having low content of secondary as well as tertiary structure. Far- and near-UV CD spectroscopy showed loss of structure when pH was lowered from 7 to 0.8 but the structure loss was less than that of the protein in presence of 6M GndHCl. Intrinsic tryptophan fluorescence studies, ANS binding, and acrylamide quenching experiments supported the existence of the intermediate at low pH. The unfolding process of lentil lectin at pH 1 was also studied by GndHCl denaturation monitored by intrinsic fluorescence spectroscopy. The non-cooperative unfolding at pH 1, in contrast to cooperative unfolding of the native protein further confirmed the presence of loose tertiary structure. The unfolded structure of the lectin at pH 1 was also shown by limited tryptic digestion studies. Further studies were performed on this intermediate state of lentil lectin obtained at low pH in presence of fluoroalcohols 2,2,2-trifluoroethanol (TFE) and 1,1,1,3,3,3-hexafluoroisopropanol (HFIP). Lentil lectin is mainly a beta-sheet protein, and both TFE and HFIP stabilized the acid unfolded structure by inducing alpha-helical contacts. Interestingly, it was observed that induction of the non-native structure resulted in regain of protein activity to some extent. At pH 1, loss in activity was found with both dextran and bromelain while the reported intermediate at the given pH was found to regain activity with bromelain in presence of HFIP and TFE. HFIP induced more structure as compared to TFE and hence a greater regain in activity of about 30% was observed with HFIP as compared to a 15% regain with TFE. Activity with dextran in presence of fluoroalcohols could not be determined as turbidity developed in the corresponding blank preparations. Our results presented here point out the possibility of the formation of a helical structure preceding the formation of the native beta-sheet structure and thus support the non-hierarchical model of protein folding for lentil lectin.
小扁豆凝集素的一种中间状态在pH值为1时被表征,其二级和三级结构含量较低。远紫外和近紫外圆二色光谱显示,当pH值从7降至0.8时结构丧失,但结构丧失程度小于在6M盐酸胍存在下蛋白质的结构丧失程度。内源性色氨酸荧光研究、ANS结合和丙烯酰胺猝灭实验支持了低pH下中间状态的存在。还通过内源性荧光光谱监测盐酸胍变性研究了小扁豆凝集素在pH值为1时的去折叠过程。与天然蛋白质的协同去折叠相反,pH值为1时的非协同去折叠进一步证实了松散三级结构的存在。有限胰蛋白酶消化研究也表明了凝集素在pH值为1时的去折叠结构。对在低pH下在氟代醇2,2,2-三氟乙醇(TFE)和1,1,1,3,3,3-六氟异丙醇(HFIP)存在下获得的小扁豆凝集素的这种中间状态进行了进一步研究。小扁豆凝集素主要是一种β-折叠蛋白,TFE和HFIP都通过诱导α-螺旋接触来稳定酸性去折叠结构。有趣的是,观察到非天然结构的诱导在一定程度上导致了蛋白质活性的恢复。在pH值为1时,发现与葡聚糖和菠萝蛋白酶的活性均丧失,而在给定pH值下报道的中间状态在HFIP和TFE存在下与菠萝蛋白酶一起时被发现恢复了活性。与TFE相比,HFIP诱导了更多的结构,因此观察到与TFE 15%的活性恢复相比,HFIP有大约30%的更大活性恢复。由于在相应的空白制剂中出现浑浊,无法确定氟代醇存在下与葡聚糖的活性。我们在此呈现的结果指出了在天然β-折叠结构形成之前形成螺旋结构的可能性,从而支持了小扁豆凝集素蛋白质折叠的非层次模型。