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寡聚伴侣蛋白10的结构稳定性:N端和C端两条β链在结构稳定中的作用

Structural stability of oligomeric chaperonin 10: the role of two beta-strands at the N and C termini in structural stabilization.

作者信息

Sakane Isao, Ikeda Mitsuyoshi, Matsumoto Chiduru, Higurashi Takashi, Inoue Katsuaki, Hongo Kunihiro, Mizobata Tomohiro, Kawata Yasushi

机构信息

Department of Biotechnology, Faculty of Engineering, Institute of Regenerative Medicine and Biofunction, Graduate School of Medical Science, Tottori University, Koyama-Minami, Tottori 680-8552, Japan.

出版信息

J Mol Biol. 2004 Dec 3;344(4):1123-33. doi: 10.1016/j.jmb.2004.09.082.

DOI:10.1016/j.jmb.2004.09.082
PMID:15544816
Abstract

Chaperonin 10 (cpn10) is a well-conserved subgroup of the molecular chaperone family. GroES, the cpn10 from Escherichia coli, is composed of seven 10kDa subunits, which form a dome-like oligomeric ring structure. From our previous studies, it was found that GroES unfolded completely through a three-state unfolding mechanism involving a partly folded monomer and that this reaction was reversible. In order to study whether these unfolding-refolding characteristics were conserved in other cpn10 proteins, we have examined the structural stabilities of cpn10s from rat mitochondria (RatES) and from hyperthermophilic eubacteria Thermotoga maritima (TmaES), and compared the values to those of GroES. From size-exclusion chromatography experiments in the presence of various concentrations of Gdn-HCl at 25 degrees C, both cpn10s showed unfolding-refolding characteristics similar to those of GroES, i.e. two-stage unfolding reactions that include formation of a partially folded monomer. Although the partially folded monomer of TmaES was considerably more stable compared to GroES and RatES, it was found that the overall stabilities of all three cpn10s were achieved significantly by inter-subunit interactions. We studied this contribution of inter-subunit interactions to overall stability in the GroES heptamer by introducing a mutation that perturbed subunit association, specifically the interaction between the two anti-parallel beta-strands at the N and C termini of this protein. From analyses of the mutants' stabilities, it was revealed that the anti-parallel beta-strands at the subunit interface are crucial for subunit association and stabilization of the heptameric GroES protein.

摘要

伴侣蛋白10(cpn10)是分子伴侣家族中一个高度保守的亚群。GroES是大肠杆菌中的cpn10,由七个10kDa的亚基组成,形成一个圆顶状的寡聚环结构。我们之前的研究发现,GroES通过涉及部分折叠单体的三态解折叠机制完全解折叠,并且该反应是可逆的。为了研究这些解折叠-重折叠特性是否在其他cpn10蛋白中保守,我们检测了大鼠线粒体cpn10(RatES)和嗜热真细菌嗜热栖热菌cpn10(TmaES)的结构稳定性,并将这些值与GroES的值进行比较。在25℃下,在存在各种浓度的盐酸胍的情况下进行尺寸排阻色谱实验,两种cpn10都表现出与GroES相似的解折叠-重折叠特性,即包括形成部分折叠单体的两阶段解折叠反应。尽管与GroES和RatES相比,TmaES的部分折叠单体相当稳定,但发现所有三种cpn10的整体稳定性都通过亚基间相互作用显著实现。我们通过引入一个扰乱亚基缔合的突变,特别是该蛋白N和C末端两条反平行β链之间的相互作用,研究了亚基间相互作用对GroES七聚体整体稳定性的贡献。通过对突变体稳定性的分析,揭示了亚基界面处的反平行β链对于七聚体GroES蛋白的亚基缔合和稳定至关重要。

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Structural stability of oligomeric chaperonin 10: the role of two beta-strands at the N and C termini in structural stabilization.寡聚伴侣蛋白10的结构稳定性:N端和C端两条β链在结构稳定中的作用
J Mol Biol. 2004 Dec 3;344(4):1123-33. doi: 10.1016/j.jmb.2004.09.082.
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Structural stability of covalently linked GroES heptamer: advantages in the formation of oligomeric structure.共价连接的GroES七聚体的结构稳定性:在寡聚体结构形成中的优势
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Unfolding and refolding of Escherichia coli chaperonin GroES is expressed by a three-state model.大肠杆菌伴侣蛋白GroES的去折叠和再折叠过程由一个三态模型来描述。
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Structural stability and solution structure of chaperonin GroES heptamer studied by synchrotron small-angle X-ray scattering.通过同步辐射小角X射线散射研究伴侣蛋白GroES七聚体的结构稳定性和溶液结构
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Characterisation of mutations in GroES that allow GroEL to function as a single ring.允许GroEL作为单环发挥功能的GroES突变的特征分析。
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Interface mutation in heptameric co-chaperonin protein 10 destabilizes subunits but not interfaces.七聚体共伴侣蛋白10中的界面突变会使亚基不稳定,但不会使界面不稳定。
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J Mol Biol. 2008 Apr 11;377(5):1593-606. doi: 10.1016/j.jmb.2008.02.012. Epub 2008 Feb 14.

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Beyond Antibodies: Development of a Novel Protein Scaffold Based on Human Chaperonin 10.超越抗体:基于人伴侣蛋白 10 的新型蛋白质支架的开发。
Sci Rep. 2016 Nov 22;5:37348. doi: 10.1038/srep37348.
2
Screening on human hepatoma cell line HepG-2 nucleus and cytoplasm protein after CDK2 silencing by RNAi.经 RNAi 沉默 CDK2 后对 HepG-2 细胞核和细胞质蛋白进行的筛选。
Cytotechnology. 2014 Aug;66(4):567-74. doi: 10.1007/s10616-013-9604-0. Epub 2014 May 7.
3
Prying open single GroES ring complexes by force reveals cooperativity across domains.
用力撬开单个 GroES 环复合物会揭示出跨结构域的协同性。
Biophys J. 2012 Apr 18;102(8):1961-8. doi: 10.1016/j.bpj.2012.03.046.
4
Mechanical unfolding of covalently linked GroES: evidence of structural subunit intermediates.共价连接的GroES的机械展开:结构亚基中间体的证据。
Protein Sci. 2009 Jan;18(1):252-7. doi: 10.1002/pro.7.