ESTAP——一种用于分析EST数据的自动化系统。

ESTAP--an automated system for the analysis of EST data.

作者信息

Mao Chunhong, Cushman John C, May Gregory D, Weller Jennifer W

机构信息

Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA.

出版信息

Bioinformatics. 2003 Sep 1;19(13):1720-2. doi: 10.1093/bioinformatics/btg205.

DOI:10.1093/bioinformatics/btg205

PMID:15593407

Abstract

The EST Analysis Pipeline (ESTAP) is a set of analytical procedures that automatically verify, cleanse, store and analyze ESTs generated on high-throughput platforms. It uses a relational database to store sequence data and analysis results, which facilitates both the search for specific information and statistical analysis. ESTAP provides for easy viewing of the original and cleansed data, as well as the analysis results via a Web browser. It also allows the data owner to submit selected sequences to dbEST in a semi-automated fashion.

摘要

EST 分析流程（ESTAP）是一组分析程序，可自动验证、清理、存储和分析在高通量平台上生成的 EST。它使用关系数据库来存储序列数据和分析结果，这便于搜索特定信息和进行统计分析。ESTAP 支持通过网络浏览器轻松查看原始数据、清理后的数据以及分析结果。它还允许数据所有者以半自动方式将选定的序列提交到 dbEST。