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在谷物中,功能性拷贝转移至细胞核后,线粒体定位的S19核糖体蛋白基因的命运。

Fate of mitochondrially located S19 ribosomal protein genes after transfer of a functional copy to the nucleus in cereals.

作者信息

Fallahi Magid, Crosthwait Jennifer, Calixte Sophie, Bonen Linda

机构信息

Biology Department, University of Ottawa, 30 Marie Curie, Ottawa, Canada, K1N 6N5.

出版信息

Mol Genet Genomics. 2005 Mar;273(1):76-83. doi: 10.1007/s00438-004-1102-9. Epub 2005 Feb 15.

Abstract

Mitochondrial genes for ribosomal proteins undergo relatively frequent transfer to the nucleus during plant evolution, and when migration is successful the mitochondrial copy becomes redundant and can be lost. We have examined the status of the mitochondrial rps19 gene for ribosomal protein S19 in closely related cereals. In oat, the mitochondrial rps19 reading frame is blocked by a premature termination codon and lacks abundant transcripts, whereas in the mitochondria of wheat and rye rps19 is a 5'-truncated pseudogene which is co-transcribed with the downstream nad4L gene. In barley and maize, rps19 sequences are completely absent from the mitochondrion. All five of these cereals differ from rice, in which an intact, transcriptionally active mitochondrial rps19 gene is found, and this is preceded by rpl2 in an organization reminiscent of that seen in bacteria. Based on EST sequence data for maize, barley and wheat, it can be inferred that a functional rps19 gene was transferred to the nucleus prior to the divergence of the maize and rice lineages (approximately 50 million years ago), and the present-day nuclear copies encode an N-terminal sequence related to the mitochondrial targeting signal of Hsp70 (heat shock protein) in cereals. Subsequent evolutionary events have included independent losses of the mitochondrial copies in the barley and maize lineages. In the rice lineage, on the other hand, the nuclear copy was lost. This is reflected in the persistence of the mitochondrial rps19 after a period during which rps19 genes coexisted in both compartments. These observations illustrate the dynamic nature of the location and structure of genes for mitochondrial ribosomal proteins in flowering plants.

摘要

在植物进化过程中,核糖体蛋白的线粒体基因相对频繁地转移到细胞核中,当转移成功时,线粒体拷贝就会变得多余并可能丢失。我们研究了近缘谷物中核糖体蛋白S19的线粒体rps19基因的状态。在燕麦中,线粒体rps19阅读框被一个提前终止密码子阻断,且缺乏丰富的转录本,而在小麦和黑麦的线粒体中,rps19是一个5'端截短的假基因,它与下游的nad4L基因共转录。在大麦和玉米中,线粒体中完全没有rps19序列。这五种谷物都与水稻不同,在水稻中发现了一个完整的、转录活跃的线粒体rps19基因,并且在其之前有rpl2,这种基因组织让人联想到细菌中的情况。根据玉米、大麦和小麦的EST序列数据可以推断,在玉米和水稻谱系分化之前(大约5000万年前),一个功能性的rps19基因转移到了细胞核中,如今的核拷贝编码一个与谷物中Hsp70(热休克蛋白)的线粒体靶向信号相关的N端序列。随后的进化事件包括大麦和玉米谱系中线粒体拷贝的独立丢失。另一方面,在水稻谱系中,核拷贝丢失了。这反映在rps19基因在两个区室中共存一段时间后,线粒体rps19仍然存在。这些观察结果说明了开花植物中线粒体核糖体蛋白基因的位置和结构的动态性质。

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