Suppr超能文献

利用盖尔维牛早期生长数据,通过多性状和线性样条随机回归模型估计遗传参数。

Genetic parameters estimated with multitrait and linear spline-random regression models using Gelbvieh early growth data.

作者信息

Iwaisaki H, Tsuruta S, Misztal I, Bertrand J K

机构信息

Department of Agro-biology, Niigata University, Niigata 950-2181, Japan.

出版信息

J Anim Sci. 2005 Apr;83(4):757-63. doi: 10.2527/2005.834757x.

Abstract

Estimates of direct and maternal genetic parameters in beef cattle were obtained with a random regression model with a linear spline function (SFM) and were compared with those obtained by a multitrait model (MTM). Weight data of 18,900 Gelbvieh calves were used, of which 100, 75, and 17% had birth (BWT), weaning (WWT), and yearling (YWT) weights, respectively. The MTM analysis was conducted with a three-trait maternal animal model. The MTM included an overall linear partial fixed regression on age at recording for WWT and YWT, and direct-maternal genetic and maternal permanent environmental effects. The SFM included the same effects as MTM, plus a direct permanent environmental effect and heterogeneous residual variance. Three knots, or breakpoints, were set to 1, 205, and 365 d. (Co)variance components in both models were estimated with a Bayesian implementation via Gibbs sampling using flat priors. Because BWT had no variability of age at recording, there was good agreement between corresponding components of variance estimated from both models. For WWT and YWT, with the exception of the sum of direct permanent environmental and residual variances, there was a general tendency for SFM estimates of variances to be lower than MTM estimates. Direct and maternal heritability estimates with SFM tended to be lower than those estimated with MTM. For example, the direct heritability for YWT was 0.59 with MTM, and 0.48 with SFM. Estimated genetic correlations for direct and maternal effects with SFM were less negative than those with MTM. For example, the direct-maternal correlation for WWT was -0.43 with MTM and -0.33 with SFM. Estimates with SFM may be superior to MTM due to better modeling of age in both fixed and random effects.

摘要

利用具有线性样条函数(SFM)的随机回归模型获得了肉牛直接遗传参数和母体遗传参数的估计值,并将其与多性状模型(MTM)获得的估计值进行比较。使用了18900头格尔维牛犊牛的体重数据,其中分别有100%、75%和17%的牛犊有出生体重(BWT)、断奶体重(WWT)和周岁体重(YWT)数据。MTM分析采用三性状母体动物模型进行。MTM包括对WWT和YWT记录时年龄的总体线性部分固定回归,以及直接母体遗传效应和母体永久环境效应。SFM包括与MTM相同的效应,外加直接永久环境效应和异质残差方差。设置了三个节点或断点,分别为1、205和365天。两个模型中的(协)方差成分通过贝叶斯方法,使用平坦先验通过吉布斯抽样进行估计。由于BWT在记录时年龄没有变异性,两个模型估计的相应方差成分之间有很好的一致性。对于WWT和YWT,除了直接永久环境方差和残差方差之和外,SFM估计的方差总体上有低于MTM估计的趋势。SFM估计的直接遗传力和母体遗传力往往低于MTM估计值。例如,YWT的直接遗传力MTM估计为0.59,SFM估计为0.48。SFM估计的直接效应和母体效应的遗传相关性比MTM估计的遗传相关性负性更小。例如,WWT的直接母体相关性MTM为-0.43,SFM为-0.33。由于在固定效应和随机效应中对年龄进行了更好的建模,SFM估计可能优于MTM。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验