Zheng Min, Wu Yi-jun, Cai Wei-min, Weng Hong-lei, Liu Rong-hua
Institute of Infectious Diseases, First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou 310003, China.
J Zhejiang Univ Sci B. 2005 Apr;6(4):280-7. doi: 10.1631/jzus.2005.B0280.
To construct a hepatic stellate cells (HSCs) subtracted cDNA library to find differentially expressed genes in normal mice and mice infected with Schistosoma japonicum (S. japonicum). Suppression subtractive hybridization (SSH) was used. The cDNA fragments of normal mouse were compared to those of schistosoma-infected mice to find differentially expressed genes. Then differentially expressed cDNA fragments were directly inserted into T/A cloning vector to set up the subtractive library. Amplification of the library was carried out with transformation of DH5alpha. The amplified library contained more than 400 positive bacterial clone, which were then hybridized with forward and backward subtracted probes for differential screening. One hundred positive bacterial clones were randomly selected for sequencing and BLAST analysis. Finally, virtual Northern Blot confirmed such differential expression. The subtracted cDNA library of differentially expressed genes of HSCs was constructed successfully, the library is efficient and lays foundation for screening and cloning new and specific genes of schistosomiasis.
构建肝星状细胞(HSCs)消减cDNA文库,以寻找正常小鼠和感染日本血吸虫(S. japonicum)小鼠中差异表达的基因。采用抑制性消减杂交(SSH)技术。将正常小鼠的cDNA片段与感染血吸虫小鼠的cDNA片段进行比较,以发现差异表达的基因。然后将差异表达的cDNA片段直接插入T/A克隆载体中构建消减文库。通过DH5alpha转化对文库进行扩增。扩增后的文库包含400多个阳性细菌克隆,随后用正向和反向消减探针进行杂交以进行差异筛选。随机选择100个阳性细菌克隆进行测序和BLAST分析。最后,通过虚拟Northern印迹证实了这种差异表达。成功构建了HSCs差异表达基因的消减cDNA文库,该文库效率高,为血吸虫病新的特异性基因的筛选和克隆奠定了基础。