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通过体内DNA改组鉴定链霉菌磷脂酶D的关键氨基酸残基以提高热稳定性

Identification of a key amino acid residue of Streptomyces phospholipase D for thermostability by in vivo DNA shuffling.

作者信息

Negishi Tomofumi, Mukaihara Takafumi, Mori Koichi, Nishikido Hiroko, Kawasaki Yuko, Aoki Hiroyuki, Kodama Michiko, Uedaira Hatsuho, Uesugi Yoshiko, Iwabuchi Masaki, Hatanaka Tadashi

机构信息

Research Institute for Biological Sciences, Okayama (RIBS), 7549-1 Kibichuo-cho, Kaga-gun, Okayama 716-1241, Japan.

出版信息

Biochim Biophys Acta. 2005 Apr 15;1722(3):331-42. doi: 10.1016/j.bbagen.2005.01.009.

Abstract

To isolate thermostability-related amino acid residues of Streptomyces phospholipase D (PLD), we constructed a chimeral genes library between two highly homologous plds, which exhibited different thermostabilities, by an in vivo DNA shuffling method using Escherichia coli that has a mutation of a single-stranded DNA-binding protein gene. To confirm the location of the recombination site, we carried out the restriction mapping of 68 chimeral pld genes. The recombination sites were widely dispersed over the entire pld sequence. Moreover, we examined six chimeral PLDs by comparing their thermostabilities with those of parental PLDs. To identify a thermostability-related amino acid residue, we investigated the thermostability of chimera C that was the most thermolabile among the six chimeras. We identified the thermostability-related factor Gly-188, which is located in the alpha-7 helix of PLD from Streptomyces septatus TH-2 (TH-2PLD). TH-2PLD mutants, in which Gly-188 was substituted with Phe, Val or Trp, exhibited higher thermostabilities than that of the parental PLD. Gly-188 substituted with the Phe mutant, which was the most stable among the mutants, showed an enzyme activity almost the same as that of TH-2PLD as determine by kinetic analysis.

摘要

为了分离链霉菌磷脂酶D(PLD)中与热稳定性相关的氨基酸残基,我们利用大肠杆菌(其单链DNA结合蛋白基因发生了突变)通过体内DNA改组方法构建了两个具有不同热稳定性的高度同源的pld之间的嵌合基因文库。为了确认重组位点的位置,我们对68个嵌合pld基因进行了限制性图谱分析。重组位点广泛分布在整个pld序列上。此外,我们通过比较六个嵌合PLD与亲本PLD的热稳定性来对它们进行了研究。为了鉴定与热稳定性相关的氨基酸残基,我们研究了六个嵌合体中热稳定性最低的嵌合体C的热稳定性。我们鉴定出了位于栖土链霉菌TH-2(TH-2PLD)的PLD的α-7螺旋中的与热稳定性相关的因子甘氨酸-188。将甘氨酸-188替换为苯丙氨酸、缬氨酸或色氨酸的TH-2PLD突变体表现出比亲本PLD更高的热稳定性。在这些突变体中最稳定的将甘氨酸-188替换为苯丙氨酸的突变体,通过动力学分析显示其酶活性与TH-2PLD几乎相同。

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