Dang Thanh X, Farah Sammy J, Gast Alice, Robertson Channing, Carragher Bridget, Egelman Edward, Wilson-Kubalek Elizabeth M
The Department of Cell Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
J Struct Biol. 2005 Apr;150(1):90-9. doi: 10.1016/j.jsb.2005.02.002.
In this study, we use streptavidin (SA) as a model system to study helical protein array formation on lipid nanotubes, an alternative to 2D studies on lipid monolayers. We demonstrate that wild-type and a mutant form of SA form helical arrays on biotinylated lipid nanotubes. 3D maps from helical arrays of wild-type and mutant SA were reconstructed using two different approaches: Fourier-Bessel methods and an iterative single particle algorithm. The maps show that wild-type and mutant streptavidin molecules order differently. The molecular packing arrangements of SA on the surface of the lipid nanotubes differ from previously reported lattice packing of SA on biotinylated monolayers. Helical crystallization on lipid nanotubes presents an alternative platform to explore fundamentals of protein ordering, intermolecular protein interaction and phase behavior. We demonstrate that lipid nanotubes offer a robust and reproducible substrate for forming helical protein arrays which present a means for studying protein structure and structure-function relationships.
在本研究中,我们使用链霉亲和素(SA)作为模型系统,以研究脂质纳米管上螺旋蛋白阵列的形成,这是一种替代脂质单层二维研究的方法。我们证明野生型和突变形式的SA在生物素化脂质纳米管上形成螺旋阵列。使用两种不同方法重建了野生型和突变型SA螺旋阵列的三维图谱:傅里叶-贝塞尔方法和迭代单粒子算法。图谱显示野生型和突变型链霉亲和素分子的排列方式不同。SA在脂质纳米管表面的分子堆积排列与先前报道的SA在生物素化单层上的晶格堆积不同。脂质纳米管上的螺旋结晶为探索蛋白质排序、分子间蛋白质相互作用和相行为的基本原理提供了一个替代平台。我们证明脂质纳米管为形成螺旋蛋白阵列提供了一个稳健且可重复的底物,这为研究蛋白质结构和结构-功能关系提供了一种手段。