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大肠杆菌渗透传感器、转运蛋白和渗透调节剂ProP的结构模型。

A structural model for the osmosensor, transporter, and osmoregulator ProP of Escherichia coli.

作者信息

Wood Janet M, Culham Doreen E, Hillar Alexander, Vernikovska Yaroslava I, Liu Feng, Boggs Joan M, Keates Robert A B

机构信息

Department of Molecular and Cellular Biology and Guelph-Waterloo Centre for Graduate Work in Chemistry and Biochemistry, University of Guelph, Guelph N1G 2W1, Ontario, Canada.

出版信息

Biochemistry. 2005 Apr 19;44(15):5634-46. doi: 10.1021/bi047383o.

Abstract

Transporter ProP of Escherichia coli, a member of the major facilitator superfamily (MFS), acts as an osmosensor and an osmoregulator in cells and after purification and reconstitution in proteoliposomes. H(+)-osmoprotectant symport via ProP is activated when medium osmolality is elevated with membrane impermeant osmolytes. The three-dimensional structure of ProP was modeled with the crystal structure of MFS member GlpT as a template. This GlpT structure represents the inward (or cytoplasm)-facing conformation predicted by the alternating access model for transport. LacZ-PhoA fusion analysis and site-directed fluorescence labeling substantiated the membrane topology and orientation predicted by this model and most hydropathy analyses. The model predicts the presence of a proton pathway within the N-terminal six-helix bundle of ProP (as opposed to the corresponding pathway found within the C-terminal helix bundle of its paralogue, LacY). Replacement of residues within the N-terminal helix bundle impaired the osmotic activation of ProP, providing the first indication that residues outside the C-terminal domain are involved in osmosensing. Some residues that were accessible from the periplasmic side, as predicted by the structural model, were more susceptible to covalent labeling in permeabilized membrane fractions than in intact bacteria. These residues may be accessible from the cytoplasmic side in structures not represented by our current model, or their limited exposure in vivo may reflect constraints on transporter structure that are related to its osmosensory mechanism.

摘要

大肠杆菌的转运蛋白ProP是主要易化子超家族(MFS)的成员,在细胞内以及纯化并重构成蛋白脂质体后,它充当渗透传感器和渗透调节剂。当培养基渗透压因膜不通透性渗透溶质而升高时,通过ProP的H⁺-渗透保护剂同向转运被激活。ProP的三维结构以MFS成员GlpT的晶体结构为模板进行建模。这种GlpT结构代表了交替访问模型预测的向内(或面向细胞质)的构象。LacZ-PhoA融合分析和定点荧光标记证实了该模型以及大多数亲水性分析所预测的膜拓扑结构和方向。该模型预测在ProP的N端六螺旋束内存在质子通道(与其旁系同源物LacY的C端螺旋束内发现的相应通道相反)。N端螺旋束内残基的替换损害了ProP的渗透激活,这首次表明C端结构域以外的残基参与渗透感应。如结构模型所预测,一些从周质侧可接近的残基在透化膜组分中比在完整细菌中更容易受到共价标记。这些残基在我们当前模型未代表的结构中可能从细胞质侧可接近,或者它们在体内的有限暴露可能反映了与其渗透感应机制相关的转运体结构限制。

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