Bonate Peter L
Genzyme Corp., San Antonio, Texas 78229, USA.
Pharm Res. 2005 Apr;22(4):541-9. doi: 10.1007/s11095-005-2492-z. Epub 2005 Apr 7.
To introduce partially linear mixed effects models (PLMEMs), to illustrate their use, and to compare the power and Type I error rate in detecting a covariate effect with nonlinear mixed effects modeling using NONMEM.
Sparse concentration-time data from males and females (1:1) were simulated under a 1-compartment oral model where clearance was sex-dependent. All possible combinations of number of subjects (50, 75, 100, 150, 250), samples per subject (2, 4, 6), and clearance multipliers (1 to 1.25) were generated. Data were analyzed with and without sex as a covariate using PLMEM (maximum likelihood estimation) and NONMEM (first-order conditional estimation). Four covariate screening methods were examined: NONMEM using the likelihood ratio test (LRT), PLMEM using the LRT, PLMEM using Wald's test, and analysis of variance (ANOVA) of the empirical Bayes estimates (EBEs) for CL treating sex as a categorical variable. The percent of simulations rejecting the null hypothesis of no covariate effect at the 0.05 level was determined. 300 simulations were done to calculate power curves and 1000 simulations were done (with no covariate effect) to calculate Type I error rate. Actual implementation of PLMEMs is illustrated using previously published teicoplanin data.
Type I error rates were similar between PLMEM and NONMEM using the LRT, but were inflated (as high as 36%) based on PLMEM using Wald's test. Type I error rate tended to increase as the number of observations per subject increased for the LRT methods. Power curves were similar between the PLMEM and NONMEM LRT methods and were slightly more than the power curve using ANOVA on the EBEs of CL. 80% power was achieved with 4 samples per subject and 50 subjects total when the effect size was approximately 1.07, 1.07, 1.08, and 1.05 for LRT using PLMEMs, LRT using NONMEM, ANOVA on the EBEs, and Wald's test using PLMEMs, respectively.
PLMEM and NONMEM covariate screening using the LRT had similar Type I error rates and power under the data generating model. PLMEMs offers a viable alternative to NONMEM-based covariate screening.
介绍部分线性混合效应模型(PLMEMs),说明其用法,并比较使用PLMEMs与使用NONMEM进行非线性混合效应建模检测协变量效应时的检验效能和I型错误率。
在一个清除率取决于性别的一室口服模型下模拟男性和女性(1:1)的稀疏浓度-时间数据。生成受试者数量(50、75、100、150、250)、每个受试者的样本数(2、4、6)和清除率乘数(1至1.25)的所有可能组合。使用PLMEM(最大似然估计)和NONMEM(一阶条件估计)在有和没有将性别作为协变量的情况下对数据进行分析。检验了四种协变量筛选方法:使用似然比检验(LRT)的NONMEM、使用LRT的PLMEM、使用Wald检验的PLMEM以及将性别作为分类变量对CL的经验贝叶斯估计值(EBEs)进行方差分析(ANOVA)。确定在0.05水平上拒绝无协变量效应零假设的模拟百分比。进行300次模拟以计算检验效能曲线,并进行1000次模拟(无协变量效应)以计算I型错误率。使用先前发表的替考拉宁数据说明了PLMEMs的实际应用。
使用LRT时,PLMEM和NONMEM的I型错误率相似,但基于使用Wald检验的PLMEM,I型错误率被夸大(高达36%)。对于LRT方法,I型错误率倾向于随着每个受试者观察次数的增加而增加。PLMEM和NONMEM的LRT方法的检验效能曲线相似,并且略高于对CL的EBEs使用ANOVA的检验效能曲线。当效应大小分别约为1.07、1.07、1.08和1.05时,对于使用PLMEMs的LRT、使用NONMEM的LRT、对EBEs进行ANOVA以及使用PLMEMs的Wald检验,每个受试者有4个样本且总共50个受试者时可达到80%的检验效能。
在数据生成模型下,使用LRT的PLMEM和NONMEM协变量筛选具有相似的I型错误率和检验效能。PLMEMs为基于NONMEM的协变量筛选提供了一种可行的替代方法。