Monsellier Elodie, Bedouelle Hugues
Unit of Molecular Prevention and Therapy of Human Diseases (CNRS FRE 2849), Institut Pasteur, 28 rue Docteur Roux, 75724 Paris Cedex 15, France.
Protein Eng Des Sel. 2005 Sep;18(9):445-56. doi: 10.1093/protein/gzi046. Epub 2005 Aug 8.
The fluorescence of tryptophan is used as a signal to monitor the unfolding of proteins, in particular the intensity of fluorescence and the wavelength of its maximum lambda(max). The law of the signal is linear with respect to the concentrations of the reactants for the intensity but not for lambda(max). Consequently, the stability of a protein and its variation upon mutation cannot be deduced directly from measurements made with lambda(max). Here, we established a rigorous law of the signal for lambda(max). We then compared the stability DeltaG(H(2)O) and coefficient of cooperativity m for a two-state equilibrium of unfolding, monitored with lambda(max), when the rigorous and empirical linear laws of the signal are applied. The corrective terms involve the curvature of the emission spectra at their lambda(max) and can be determined experimentally. The rigorous and empirical values of the cooperativity coefficient m are equal within the experimental error for this parameter. In contrast, the rigorous and empirical values of the stability DeltaG(H(2)O) generally differ. However, they are equal within the experimental error if the curvatures of the spectra for the native and unfolded states are identical. We validated this analysis experimentally using domain 3 of the envelope glycoprotein of the dengue virus and the single-chain variable fragment (scFv) of antibody mAbD1.3, directed against lysozyme.
色氨酸的荧光被用作监测蛋白质解折叠的信号,特别是荧光强度及其最大波长λ(max)。信号规律对于强度而言与反应物浓度呈线性关系,但对于λ(max)并非如此。因此,不能直接从λ(max)的测量结果推断蛋白质的稳定性及其突变后的变化。在此,我们建立了关于λ(max)的严格信号规律。然后,当应用严格和经验线性信号规律时,我们比较了用λ(max)监测的两态解折叠平衡的稳定性ΔG(H₂O)和协同系数m。校正项涉及发射光谱在其λ(max)处的曲率,并且可以通过实验确定。协同系数m的严格值和经验值在该参数的实验误差范围内相等。相比之下,稳定性ΔG(H₂O)的严格值和经验值通常不同。然而,如果天然态和未折叠态光谱的曲率相同,它们在实验误差范围内相等。我们使用登革病毒包膜糖蛋白的结构域3和针对溶菌酶的抗体mAbD1.3的单链可变片段(scFv)通过实验验证了这一分析。