• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

用于胰岛移植表达研究的合适内参基因的选择。

Selection of a suitable internal control gene for expression studies in pancreatic islet grafts.

作者信息

Rodriguez-Mulero Sílvia, Montanya Eduard

机构信息

Laboratory of Diabetes and Experimental Endocrinology, Department of Medicine, IDIBELL-University of Barcelona, Spain.

出版信息

Transplantation. 2005 Sep 15;80(5):650-2. doi: 10.1097/01.tp.0000173790.12227.7b.

DOI:10.1097/01.tp.0000173790.12227.7b
PMID:16177640
Abstract

The use of real-time reverse transcription polymerase chain reaction to compare gene expression in different tissues and conditions requires normalization to an internal control that must be expressed at a constant level. Although a previous validation step is required to confirm that an internal control is appropriate, no comparison of frequently used "housekeeping" genes is available for islet grafts. We have investigated the effect of transplantation and metabolic environment on the expression of 18S, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), beta-actin, and cyclophilin A genes in pancreatic islets. The expression of these genes was determined on days 1, 3, and 7 after transplantation into normoglycemic or hyperglycemic rats and in isolated islets. Only 18S gene expression remained stable in all studied conditions, indicating that it is the best internal control for gene expression analysis in islet grafts. The significant variation found in other housekeeping genes, particularly GAPDH and beta-actin, question their use as internal controls in islet grafts.

摘要

使用实时逆转录聚合酶链反应来比较不同组织和条件下的基因表达,需要将其标准化至一个必须以恒定水平表达的内参基因。虽然之前需要一个验证步骤来确认一个内参基因是否合适,但目前尚无针对胰岛移植中常用“管家”基因的比较研究。我们研究了移植和代谢环境对胰腺胰岛中18S、甘油醛-3-磷酸脱氢酶(GAPDH)、β-肌动蛋白和亲环素A基因表达的影响。在移植到血糖正常或高血糖大鼠体内以及分离的胰岛中,于移植后第1、3和7天测定这些基因的表达。在所有研究条件下,只有18S基因表达保持稳定,这表明它是胰岛移植中基因表达分析的最佳内参基因。在其他管家基因中发现的显著差异,尤其是GAPDH和β-肌动蛋白,质疑了它们作为胰岛移植内参基因的适用性。

相似文献

1
Selection of a suitable internal control gene for expression studies in pancreatic islet grafts.用于胰岛移植表达研究的合适内参基因的选择。
Transplantation. 2005 Sep 15;80(5):650-2. doi: 10.1097/01.tp.0000173790.12227.7b.
2
β-actin gene expression is variable among individuals and not suitable for normalizing mRNA levels in Portunus trituberculatus.β-actin 基因表达在个体之间存在变异性,不适合作为三疣梭子蟹 mRNA 水平的内参基因。
Fish Shellfish Immunol. 2018 Oct;81:338-342. doi: 10.1016/j.fsi.2018.07.021. Epub 2018 Jul 12.
3
Influence of diabetes on the loss of beta cell differentiation after islet transplantation in rats.糖尿病对大鼠胰岛移植后β细胞分化丧失的影响。
Diabetologia. 2007 Oct;50(10):2117-25. doi: 10.1007/s00125-007-0749-2. Epub 2007 Jul 20.
4
Validation of reference genes for real-time quantitative RT-PCR studies in Talaromyces marneffei.马尔尼菲篮状菌实时定量逆转录PCR研究中内参基因的验证
J Microbiol Methods. 2015 Nov;118:42-50. doi: 10.1016/j.mimet.2015.08.015. Epub 2015 Aug 29.
5
Utility of the housekeeping genes 18S rRNA, beta-actin and glyceraldehyde-3-phosphate-dehydrogenase for normalization in real-time quantitative reverse transcriptase-polymerase chain reaction analysis of gene expression in human T lymphocytes.看家基因18S rRNA、β-肌动蛋白和甘油醛-3-磷酸脱氢酶在人T淋巴细胞基因表达的实时定量逆转录-聚合酶链反应分析中用于标准化的效用。
Scand J Immunol. 2004 Jun;59(6):566-73. doi: 10.1111/j.0300-9475.2004.01440.x.
6
Validation of endogenous controls for gene expression analysis in microdissected human renal biopsies.微切割人肾活检组织中用于基因表达分析的内参的验证
Kidney Int. 2003 Jul;64(1):356-60. doi: 10.1046/j.1523-1755.2003.00074.x.
7
Housekeeping while brain's storming Validation of normalizing factors for gene expression studies in a murine model of traumatic brain injury.大脑风暴时的日常工作:创伤性脑损伤小鼠模型中基因表达研究标准化因子的验证
BMC Mol Biol. 2008 Jul 8;9:62. doi: 10.1186/1471-2199-9-62.
8
Selection of reference genes for quantitative gene expression studies in the house fly (Musca domestica L.) using reverse transcription quantitative real-time PCR.使用逆转录定量实时PCR技术筛选家蝇(Musca domestica L.)定量基因表达研究中的内参基因。
Acta Biochim Biophys Sin (Shanghai). 2013 Dec;45(12):1069-73. doi: 10.1093/abbs/gmt111. Epub 2013 Oct 10.
9
Ribosomal 18S RNA prevails over glyceraldehyde-3-phosphate dehydrogenase and beta-actin genes as internal standard for quantitative comparison of mRNA levels in invasive and noninvasive human melanoma cell subpopulations.作为对侵袭性和非侵袭性人类黑色素瘤细胞亚群中mRNA水平进行定量比较的内参标准,核糖体18S RNA优于甘油醛-3-磷酸脱氢酶和β-肌动蛋白基因。
Anal Biochem. 2001 Aug 1;295(1):17-21. doi: 10.1006/abio.2001.5171.
10
18S rRNA is a reliable normalisation gene for real time PCR based on influenza virus infected cells.18S rRNA 是基于流感病毒感染细胞的实时 PCR 的可靠标准化基因。
Virol J. 2012 Oct 8;9:230. doi: 10.1186/1743-422X-9-230.

引用本文的文献

1
A functional genomic approach to identify reference genes for human pancreatic beta cell real-time quantitative RT-PCR analysis.一种功能基因组学方法,用于鉴定人胰腺β细胞实时定量 RT-PCR 分析的参考基因。
Islets. 2021 Jul 4;13(3-4):51-65. doi: 10.1080/19382014.2021.1948282. Epub 2021 Jul 9.
2
Unstable Expression of Commonly Used Reference Genes in Rat Pancreatic Islets Early after Isolation Affects Results of Gene Expression Studies.常用参考基因在大鼠胰岛分离后早期表达不稳定影响基因表达研究结果。
PLoS One. 2016 Apr 1;11(4):e0152664. doi: 10.1371/journal.pone.0152664. eCollection 2016.
3
The necessity of and strategies for improving confidence in the accuracy of western blots.
提高蛋白质免疫印迹准确性可信度的必要性及策略
Expert Rev Proteomics. 2014 Oct;11(5):549-60. doi: 10.1586/14789450.2014.939635. Epub 2014 Jul 25.
4
Selection of reference genes for real-time PCR in human hepatocellular carcinoma tissues.人肝癌组织中实时定量PCR内参基因的筛选
J Cancer Res Clin Oncol. 2008 Sep;134(9):979-86. doi: 10.1007/s00432-008-0369-3. Epub 2008 Mar 4.
5
Expression of functional Toll-like receptors by salivary gland epithelial cells: increased mRNA expression in cells derived from patients with primary Sjögren's syndrome.唾液腺上皮细胞功能性Toll样受体的表达:原发性干燥综合征患者来源细胞中mRNA表达增加。
Clin Exp Immunol. 2007 Mar;147(3):497-503. doi: 10.1111/j.1365-2249.2006.03311.x.
6
Co-expression of vascular endothelial growth factor and interleukin-1 receptor antagonist improves human islet survival and function.血管内皮生长因子与白细胞介素-1受体拮抗剂的共表达可改善人胰岛的存活及功能。
Pharm Res. 2006 Sep;23(9):1970-82. doi: 10.1007/s11095-006-9065-7. Epub 2006 Aug 12.