Salas Antonio, Yao Yong-Gang, Macaulay Vincent, Vega Ana, Carracedo Angel, Bandelt Hans-Jürgen
Unidade de Xenética, Instituto de Medicina Legal, Facultade de Medicina, Universidad de Santiago de Compostela, Galicia, Spain.
PLoS Med. 2005 Nov;2(11):e296. doi: 10.1371/journal.pmed.0020296. Epub 2005 Oct 4.
Mitochondrial DNA (mtDNA) is being analyzed by an increasing number of laboratories in order to investigate its potential role as an active marker of tumorigenesis in various types of cancer. Here we question the conclusions drawn in most of these investigations, especially those published in high-rank cancer research journals, under the evidence that a significant number of these medical mtDNA studies are based on obviously flawed sequencing results.
In our analyses, we take a phylogenetic approach and employ thorough database searches, which together have proven successful for detecting erroneous sequences in the fields of human population genetics and forensics. Apart from conceptual problems concerning the interpretation of mtDNA variation in tumorigenesis, in most cases, blocks of seemingly somatic mutations clearly point to contamination or sample mix-up and, therefore, have nothing to do with tumorigenesis.
The role of mitochondria in tumorigenesis remains unclarified. Our findings of laboratory errors in many contributions would represent only the tip of the iceberg since most published studies do not provide the raw sequence data for inspection, thus hindering a posteriori evaluation of the results. There is no precedent for such a concatenation of errors and misconceptions affecting a whole subfield of medical research.
越来越多的实验室正在分析线粒体DNA(mtDNA),以研究其作为各种癌症肿瘤发生活性标志物的潜在作用。在此,我们对大多数此类研究得出的结论提出质疑,尤其是那些发表在高级癌症研究期刊上的结论,因为有证据表明,许多这些医学mtDNA研究是基于明显有缺陷的测序结果。
在我们的分析中,我们采用系统发育方法并进行全面的数据库搜索,这在人类群体遗传学和法医学领域已被证明在检测错误序列方面是成功的。除了在肿瘤发生中mtDNA变异解释方面的概念问题外,在大多数情况下,看似体细胞突变的区域明显表明存在污染或样本混淆,因此与肿瘤发生无关。
线粒体在肿瘤发生中的作用仍不明确。我们发现许多研究存在实验室错误,而这可能只是冰山一角,因为大多数已发表的研究并未提供原始序列数据以供检查,从而阻碍了对结果的事后评估。如此多的错误和误解影响医学研究的整个子领域,这是没有先例的。