Aarnikunnas J S, Pihlajaniemi A, Palva A, Leisola M, Nyyssölä A
Division of Microbiology and Epidemiology, Department of Basic Veterinary Sciences, Faculty of Veterinary Medicine, University of Helsinki, Finland.
Appl Environ Microbiol. 2006 Jan;72(1):368-77. doi: 10.1128/AEM.72.1.368-377.2006.
The Pantoea ananatis ATCC 43072 mutant strain is capable of growing with xylitol as the sole carbon source. The xylitol-4-dehydrogenase (XDH) catalyzing the oxidation of xylitol to L-xylulose was isolated from the cell extract of this strain. The N-terminal amino acid sequence of the purified protein was determined, and an oligonucleotide deduced from this peptide sequence was used to isolate the xylitol-4-dehydrogenase gene (xdh) from a P. ananatis gene library. Nucleotide sequence analysis revealed an open reading frame of 795 bp, encoding the xylitol-4-dehydrogenase, followed by a 5' region of another open reading frame encoding an unknown protein. Results from a Northern analysis of total RNA isolated from P. ananatis ATCC 43072 suggested that xdh is transcribed as part of a polycistronic mRNA. Reverse transcription-PCR analysis of the transcript confirmed the operon structure and suggested that xdh was the first gene of the operon. Homology searches revealed that the predicted amino acid sequence of the P. ananatis XDH shared significant identity (38 to 51%) with members of the short-chain dehydrogenase/reductase family. The P. ananatis xdh gene was successfully overexpressed in Escherichia coli, XDH was purified to homogeneity, and some of its enzymatic properties were determined. The enzyme had a preference for NAD+ as the cosubstrate, and in contrast to previous reports, the enzyme also showed a side activity for the D-form of xylulose. Xylitol was converted to L-xylulose with a high yield (>80%) by the resting recombinant cells, and the L-xylulose was secreted into the medium. No evidence of D-xylulose being synthesized by the recombinant cells was found.
菠萝泛菌ATCC 43072突变株能够以木糖醇作为唯一碳源生长。从该菌株的细胞提取物中分离出催化木糖醇氧化为L-木酮糖的木糖醇-4-脱氢酶(XDH)。测定了纯化蛋白的N端氨基酸序列,并根据该肽序列推导的寡核苷酸用于从菠萝泛菌基因文库中分离木糖醇-4-脱氢酶基因(xdh)。核苷酸序列分析显示一个795 bp的开放阅读框,编码木糖醇-4-脱氢酶,其后是另一个编码未知蛋白的开放阅读框的5'区域。对从菠萝泛菌ATCC 43072分离的总RNA进行Northern分析的结果表明,xdh作为多顺反子mRNA的一部分被转录。对转录本的逆转录PCR分析证实了操纵子结构,并表明xdh是操纵子的第一个基因。同源性搜索显示,菠萝泛菌XDH的预测氨基酸序列与短链脱氢酶/还原酶家族成员具有显著的同一性(38%至51%)。菠萝泛菌xdh基因在大肠杆菌中成功过表达,XDH被纯化至同质,并测定了其一些酶学性质。该酶优先选择NAD+作为共底物,与先前的报道相反,该酶对D-型木酮糖也表现出副活性。静止的重组细胞将木糖醇高产率(>80%)转化为L-木酮糖,并且L-木酮糖分泌到培养基中。未发现重组细胞合成D-木酮糖的证据。