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affy--analysis of Affymetrix GeneChip data at the probe level.
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ESTprep: preprocessing cDNA sequence reads.
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Comparative genome analyses reveal distinct structure in the saltwater crocodile MHC.
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The tammar wallaby major histocompatibility complex shows evidence of past genomic instability.
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Genomic tools development for Aquilegia: construction of a BAC-based physical map.
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Fine mapping of the sunflower resistance locus Pl(ARG) introduced from the wild species Helianthus argophyllus.
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Genomic analysis of wild tomato introgressions determining metabolism- and yield-associated traits.
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An empirical study of choosing efficient discriminative seeds for oligonucleotide design.
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Physical mapping of the elephant X chromosome: conservation of gene order over 105 million years.
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本文引用的文献

1
Rapid large-scale oligonucleotide selection for microarrays.
Proc IEEE Comput Soc Bioinform Conf. 2002;1:54-63.
2
Efficient selection of unique and popular oligos for large EST databases.
Bioinformatics. 2004 Sep 1;20(13):2101-12. doi: 10.1093/bioinformatics/bth210. Epub 2004 Apr 1.
4
The TIGR Plant Repeat Databases: a collective resource for the identification of repetitive sequences in plants.
Nucleic Acids Res. 2004 Jan 1;32(Database issue):D360-3. doi: 10.1093/nar/gkh099.
5
A general method for the isolation of RNA complementary to DNA.
Proc Natl Acad Sci U S A. 1962 Aug;48(8):1390-7. doi: 10.1073/pnas.48.8.1390.
6
PROBEmer: A web-based software tool for selecting optimal DNA oligos.
Nucleic Acids Res. 2003 Jul 1;31(13):3746-50. doi: 10.1093/nar/gkg569.
7
Design of oligonucleotides for microarrays and perspectives for design of multi-transcriptome arrays.
Nucleic Acids Res. 2003 Jul 1;31(13):3491-6. doi: 10.1093/nar/gkg622.
8
OligoArray 2.0: design of oligonucleotide probes for DNA microarrays using a thermodynamic approach.
Nucleic Acids Res. 2003 Jun 15;31(12):3057-62. doi: 10.1093/nar/gkg426.
9
10
OligoArray: genome-scale oligonucleotide design for microarrays.
Bioinformatics. 2002 Mar;18(3):486-7. doi: 10.1093/bioinformatics/18.3.486.

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