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核苷酸特异性残基在调节结核分枝杆菌Rv1625c腺苷酸环化酶寡聚化中作用的结构基础。

A structural basis for the role of nucleotide specifying residues in regulating the oligomerization of the Rv1625c adenylyl cyclase from M. tuberculosis.

作者信息

Ketkar Amit D, Shenoy Avinash R, Ramagopal Udupi A, Visweswariah Sandhya S, Suguna Kaza

机构信息

Department of Molecular Reproduction, Development and Genetics, Indian Institute of Science, Bangalore, 560012, India.

出版信息

J Mol Biol. 2006 Mar 3;356(4):904-16. doi: 10.1016/j.jmb.2005.12.017. Epub 2005 Dec 22.

Abstract

The Rv1625c Class III adenylyl cyclase from Mycobacterium tuberculosis is a homodimeric enzyme with two catalytic centers at the dimer interface, and shows sequence similarity with the mammalian adenylyl and guanylyl cyclases. Mutation of the substrate-specifying residues in the catalytic domain of Rv1625c, either independently or together, to those present in guanylyl cyclases not only failed to confer guanylyl cyclase activity to the protein, but also severely abrogated the adenylyl cyclase activity of the enzyme. Biochemical analysis revealed alterations in the behavior of the mutants on ion-exchange chromatography, indicating differences in the surface-exposed charge upon mutation of substrate-specifying residues. The mutant proteins showed alterations in oligomeric status as compared to the wild-type enzyme, and differing abilities to heterodimerize with the wild-type protein. The crystal structure of a mutant has been solved to a resolution of 2.7A. On the basis of the structure, and additional biochemical studies, we provide possible reasons for the altered properties of the mutant proteins, as well as highlight unique structural features of the Rv1625c adenylyl cyclase.

摘要

来自结核分枝杆菌的Rv1625c III类腺苷酸环化酶是一种同二聚体酶,在二聚体界面处有两个催化中心,并且与哺乳动物的腺苷酸环化酶和鸟苷酸环化酶存在序列相似性。Rv1625c催化结构域中底物特异性残基独立或共同突变为鸟苷酸环化酶中存在的残基,不仅未能赋予该蛋白鸟苷酸环化酶活性,还严重消除了该酶的腺苷酸环化酶活性。生化分析揭示了突变体在离子交换色谱行为上的改变,表明底物特异性残基突变后表面暴露电荷存在差异。与野生型酶相比,突变蛋白的寡聚状态发生了改变,并且与野生型蛋白异源二聚化的能力也不同。已解析出一种突变体的晶体结构,分辨率为2.7埃。基于该结构以及其他生化研究,我们提供了突变蛋白性质改变的可能原因,并突出了Rv1625c腺苷酸环化酶独特的结构特征。

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