Hardy Olivier J, Maggia Laurent, Bandou Eric, Breyne Peter, Caron Henri, Chevallier Marie-Hélène, Doligez Agnès, Dutech Cyril, Kremer Antoine, Latouche-Hallé Céline, Troispoux Valérie, Veron Vincent, Degen Bernd
Université Libre de Bruxelles, Service d'Eco-Ethologie Evolutive, CP 160/12, 50 Av. F. Roosevelt, B-1050 Brussels, Belgium.
Mol Ecol. 2006 Feb;15(2):559-71. doi: 10.1111/j.1365-294X.2005.02785.x.
The extent of gene dispersal is a fundamental factor of the population and evolutionary dynamics of tropical tree species, but directly monitoring seed and pollen movement is a difficult task. However, indirect estimates of historical gene dispersal can be obtained from the fine-scale spatial genetic structure of populations at drift-dispersal equilibrium. Using an approach that is based on the slope of the regression of pairwise kinship coefficients on spatial distance and estimates of the effective population density, we compare indirect gene dispersal estimates of sympatric populations of 10 tropical tree species. We re-analysed 26 data sets consisting of mapped allozyme, SSR (simple sequence repeat), RAPD (random amplified polymorphic DNA) or AFLP (amplified fragment length polymorphism) genotypes from two rainforest sites in French Guiana. Gene dispersal estimates were obtained for at least one marker in each species, although the estimation procedure failed under insufficient marker polymorphism, limited sample size, or inappropriate sampling area. Estimates generally suffered low precision and were affected by assumptions regarding the effective population density. Averaging estimates over data sets, the extent of gene dispersal ranged from 150 m to 1200 m according to species. Smaller gene dispersal estimates were obtained in species with heavy diaspores, which are presumably not well dispersed, and in populations with high local adult density. We suggest that limited seed dispersal could indirectly limit effective pollen dispersal by creating higher local tree densities, thereby increasing the positive correlation between pollen and seed dispersal distances. We discuss the potential and limitations of our indirect estimation procedure and suggest guidelines for future studies.
基因扩散的程度是热带树种种群和进化动态的一个基本因素,但直接监测种子和花粉的移动是一项艰巨的任务。然而,可以从处于漂变-扩散平衡状态的种群的精细空间遗传结构中获得对历史基因扩散的间接估计。我们使用一种基于成对亲缘系数与空间距离的回归斜率以及有效种群密度估计值的方法,比较了10种热带树种同域种群的间接基因扩散估计值。我们重新分析了26个数据集,这些数据集由来自法属圭亚那两个雨林地点的已定位的等位酶、SSR(简单序列重复)、RAPD(随机扩增多态性DNA)或AFLP(扩增片段长度多态性)基因型组成。尽管在标记多态性不足、样本量有限或采样区域不合适的情况下估计程序会失败,但每个物种至少有一个标记获得了基因扩散估计值。估计值通常精度较低,并受到有关有效种群密度假设的影响。对各数据集的估计值进行平均后,根据物种不同,基因扩散的范围在150米至1200米之间。在具有较重传播体(可能传播不佳)的物种以及当地成年树木密度较高的种群中,获得的基因扩散估计值较小。我们认为,有限的种子扩散可能会通过造成更高的当地树木密度来间接限制有效花粉扩散,从而增加花粉和种子扩散距离之间的正相关。我们讨论了我们的间接估计程序的潜力和局限性,并为未来的研究提出了指导方针。