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外显子重排在人类蛋白质信号肽进化中的可能作用。

A possible role of exon-shuffling in the evolution of signal peptides of human proteins.

作者信息

Vibranovski Maria Dulcetti, Sakabe Noboru Jo, de Souza Sandro José

机构信息

Laboratory of Computational Biology, Ludwig Institute for Cancer Research, Sao Paulo Branch, Rua Prof. Antonio Prudente 109, CEP 01509-010, São Paulo, SP, Brazil.

出版信息

FEBS Lett. 2006 Mar 6;580(6):1621-4. doi: 10.1016/j.febslet.2006.01.094. Epub 2006 Feb 10.

Abstract

It was recently shown that there is a predominance of phase 1 introns near the cleavage site of signal peptides encoded by human genes. It was suggested that this biased distribution was due to intron insertion at AGmid R:G proto-splice sites. However, we found that there is no disproportional excess of AGmid R:G that would support insertion at proto-splice sites. In fact, all nGmid R:G sites are enriched in the vicinity of the cleavage site. Additional analyses support an alternative scenario in which exon-shuffling is largely responsible for such excess of phase 1 introns.

摘要

最近的研究表明,人类基因编码的信号肽切割位点附近存在大量1类内含子。有人认为这种偏向性分布是由于内含子插入到AGmid R:G原剪接位点所致。然而,我们发现并不存在支持插入原剪接位点的AGmid R:G的不成比例的过量。事实上,所有nGmid R:G位点在切割位点附近都有富集。进一步的分析支持了另一种情况,即外显子重排很大程度上导致了1类内含子的这种过量。

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