He Jian, Huang Xing, Gu Li-feng, Jiang Jian-dong, Li Shun-peng
Key Lab of Microbiological Engineering of Agricultural Environment, Ministry of Agriculture, Microbiology Department, College of Life Science, Nanjing Agricultural University, Nanjing 210095, China.
Wei Sheng Wu Xue Bao. 2006 Feb;46(1):28-32.
Ectoine was the main compatible solute of moderately halophilic bacteria. In order to clone the ectABC gene which involved in the ectoine biosynthesis pathway from total DNA of moderately halophilic bacteria Halomonas sp. BYS-1, firstly a 750bp fragment of ectABC gene was amplified by PCR using combinations of forward primers and reverse primers designed according to the ectABC genes of Halomonas elongata 2851T and Halomonas elongata DSM3043. Then the upstream and downstream sequences of the 750bp fragment were amplified by SEFA PCR (SElf-Formed Adaptor PCR), a new PCR method amplified relatively long flanking sequences from tagged sequences in a simple way without enzyme excision and ligation. The 3532bp fragment include 2423bp ectABC, 980bp upstream sequences and 129bp downstream sequences were cloned from Halomonas sp. BYS-1 using a pair of conserved primers designed according to acquired sequences by SEFA PCR. The GenBank accession number of the 3532bp fragment is DQ017757. ORF analysis revealed that ectA, ectB, ectC cluster to an operon, the size of ectA, ectB, and ectC were 573bp, 1251bp and 387bp respectively. The predicted molecular masses of the encoded proteins were 21.1kDa (191 amino acids, EctA), 45.7 kDa (417 amino acids, EctB), and 14.5 kDa (129 amino acids, EctC) respectively. The 3532bp fragment was ligated to the MCS site of vector pUC19 and transformed E. coli DH5alpha to construct E. coli (pUC19ECT). Transformant E. coli (pUC19ECT) could synthesis ectoine under salt stress, the intracellular ectoine level were 7.1, 19.4 and 32.3 micromol/(g x dry x wt) when the salinities of the mediums were 0, 0.4 and 0.8mol/L sodium chloride respectively. But the accumulation of ectoine could not promote the growth of E. coli (pUC19ECT)under high salinity.
四氢嘧啶是中度嗜盐菌的主要相容性溶质。为了从中度嗜盐菌嗜盐单胞菌属BYS - 1的总DNA中克隆参与四氢嘧啶生物合成途径的ectABC基因,首先根据伸长嗜盐单胞菌2851T和伸长嗜盐单胞菌DSM3043的ectABC基因设计正向引物和反向引物组合,通过PCR扩增出一个750bp的ectABC基因片段。然后通过SEFA PCR(自形成接头PCR,一种无需酶切和连接就能以简单方式从标记序列扩增出相对较长侧翼序列的新PCR方法)扩增该750bp片段的上游和下游序列。使用根据SEFA PCR获得的序列设计的一对保守引物,从嗜盐单胞菌属BYS - 1中克隆出包含2423bp的ectABC、980bp上游序列和129bp下游序列的3532bp片段。该3532bp片段的GenBank登录号为DQ017757。开放阅读框分析表明ectA、ectB、ectC聚集成一个操纵子,ectA、ectB和ectC的大小分别为573bp、1251bp和387bp。预测编码蛋白的分子量分别为21.1kDa(191个氨基酸,EctA)、45.7 kDa(417个氨基酸,EctB)和14.5 kDa(129个氨基酸,EctC)。将该3532bp片段连接到载体pUC19的多克隆位点并转化大肠杆菌DH5α,构建大肠杆菌(pUC19ECT)。转化后的大肠杆菌(pUC19ECT)在盐胁迫下能够合成四氢嘧啶,当培养基中氯化钠盐度分别为0、0.4和0.8mol/L时,细胞内四氢嘧啶水平分别为7.1、19.4和32.3微摩尔/(克×干重)。但在高盐度下,四氢嘧啶的积累并不能促进大肠杆菌(pUC19ECT)的生长。