相似文献
1
Minimization of polypeptide energy, vi. Systematic searches for low-energy conformations of deca-L-alanine and the octapeptide loop of ribonuclease.
Proc Natl Acad Sci U S A. 1969 May;63(1):9-15. doi: 10.1073/pnas.63.1.9.
2
Minimization of polypeptide energy. VII. Second derivatives and statistical weights of energy minima for deca-L-alanine.
Proc Natl Acad Sci U S A. 1969 Jun;63(2):242-5. doi: 10.1073/pnas.63.2.242.
3
Determining minimum energy conformations of polypeptides by dynamic programming.
Biopolymers. 1990 Dec;29(14):1755-72. doi: 10.1002/bip.360291408.
4
5
Empirical solvation models in the context of conformational energy searches: application to bovine pancreatic trypsin inhibitor.
Proteins. 1992 Sep;14(1):110-9. doi: 10.1002/prot.340140112.
6
Prediction of DNA structure from sequence: a build-up technique.
Biopolymers. 1989 Jul;28(7):1195-222. doi: 10.1002/bip.360280703.
7
Monte Carlo minimization with thermalization for global optimization of polypeptide conformations in cartesian coordinate space.
Proteins. 1992 Sep;14(1):102-9. doi: 10.1002/prot.340140111.
8
Minimization of polypeptide energy. 8. Application of the deflation technique to a dipeptide.
Proc Natl Acad Sci U S A. 1969 Sep;64(1):42-9. doi: 10.1073/pnas.64.1.42.
9
Toward Focusing Conformational Ensembles on Bioactive Conformations: A Molecular Mechanics/Quantum Mechanics Study.
J Chem Inf Model. 2015 Oct 26;55(10):2154-67. doi: 10.1021/acs.jcim.5b00259. Epub 2015 Oct 8.
10
Monte Carlo-minimization approach to the multiple-minima problem in protein folding.
Proc Natl Acad Sci U S A. 1987 Oct;84(19):6611-5. doi: 10.1073/pnas.84.19.6611.
引用本文的文献
1
Enhancement of beta-sheet assembly by cooperative hydrogen bonds potential.
Bioinformatics. 2009 Oct 15;25(20):2639-45. doi: 10.1093/bioinformatics/btp449. Epub 2009 Jul 23.
2
Minimization of polypeptide energy. 8. Application of the deflation technique to a dipeptide.
Proc Natl Acad Sci U S A. 1969 Sep;64(1):42-9. doi: 10.1073/pnas.64.1.42.
3
Minimization of polypeptide energy. VII. Second derivatives and statistical weights of energy minima for deca-L-alanine.
Proc Natl Acad Sci U S A. 1969 Jun;63(2):242-5. doi: 10.1073/pnas.63.2.242.
本文引用的文献
1
A proposal of standard conventions and nomenclature for the description of polypeptide conformation.
J Biol Chem. 1966 Feb 25;241(4):1004-8.
2
The influence of short-range interactions on protein conformation. I. Side chain-backbone interactions within a single peptide unit.
Proc Natl Acad Sci U S A. 1968 Dec;61(4):1163-70. doi: 10.1073/pnas.61.4.1163.
3
Minimization of polypeptide energy. I. Preliminary structures of bovine pancreatic ribonuclease S-peptide.
Proc Natl Acad Sci U S A. 1967 Aug;58(2):420-7. doi: 10.1073/pnas.58.2.420.
Zotero 插件