• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

由质粒pJP4编码的氯酚羟化酶对氯苯氧基乙酸的降解有不同贡献。

Chlorophenol hydroxylases encoded by plasmid pJP4 differentially contribute to chlorophenoxyacetic acid degradation.

作者信息

Ledger T, Pieper D H, González B

机构信息

Laboratorio de Microbiología, Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Casilla 114-D, Santiago, Chile.

出版信息

Appl Environ Microbiol. 2006 Apr;72(4):2783-92. doi: 10.1128/AEM.72.4.2783-2792.2006.

DOI:10.1128/AEM.72.4.2783-2792.2006
PMID:16597983
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1448979/
Abstract

Phenoxyalkanoic compounds are used worldwide as herbicides. Cupriavidus necator JMP134(pJP4) catabolizes 2,4-dichlorophenoxyacetate (2,4-D) and 4-chloro-2-methylphenoxyacetate (MCPA), using tfd functions carried on plasmid pJP4. TfdA cleaves the ether bonds of these herbicides to produce 2,4-dichlorophenol (2,4-DCP) and 4-chloro-2-methylphenol (MCP), respectively. These intermediates can be degraded by two chlorophenol hydroxylases encoded by the tfdB(I) and tfdB(II) genes to produce the respective chlorocatechols. We studied the specific contribution of each of the TfdB enzymes to the 2,4-D/MCPA degradation pathway. To accomplish this, the tfdB(I) and tfdB(II) genes were independently inactivated, and growth on each chlorophenoxyacetate and total chlorophenol hydroxylase activity were measured for the mutant strains. The phenotype of these mutants shows that both TfdB enzymes are used for growth on 2,4-D or MCPA but that TfdB(I) contributes to a significantly higher extent than TfdB(II). Both enzymes showed similar specificity profiles, with 2,4-DCP, MCP, and 4-chlorophenol being the best substrates. An accumulation of chlorophenol was found to inhibit chlorophenoxyacetate degradation, and inactivation of the tfdB genes enhanced the toxic effect of 2,4-DCP on C. necator cells. Furthermore, increased chlorophenol production by overexpression of TfdA also had a negative effect on 2,4-D degradation by C. necator JMP134 and by a different host, Burkholderia xenovorans LB400, harboring plasmid pJP4. The results of this work indicate that codification and expression of the two tfdB genes in pJP4 are important to avoid toxic accumulations of chlorophenols during phenoxyacetic acid degradation and that a balance between chlorophenol-producing and chlorophenol-consuming reactions is necessary for growth on these compounds.

摘要

苯氧基链烷酸化合物在全球范围内被用作除草剂。食酸铜绿假单胞菌JMP134(pJP4)利用质粒pJP4上携带的tfd功能分解代谢2,4 - 二氯苯氧基乙酸(2,4 - D)和4 - 氯 - 2 - 甲基苯氧基乙酸(MCPA)。TfdA分别裂解这些除草剂的醚键,生成2,4 - 二氯苯酚(2,4 - DCP)和4 - 氯 - 2 - 甲基苯酚(MCP)。这些中间体可被tfdB(I)和tfdB(II)基因编码的两种氯酚羟化酶降解,生成相应的氯儿茶酚。我们研究了每种TfdB酶在2,4 - D/MCPA降解途径中的具体作用。为此,分别使tfdB(I)和tfdB(II)基因失活,并测定突变菌株在每种氯苯氧基乙酸上的生长情况以及总氯酚羟化酶活性。这些突变体的表型表明,两种TfdB酶都可用于在2,4 - D或MCPA上生长,但TfdB(I)的贡献程度明显高于TfdB(II)。两种酶表现出相似的底物特异性谱,2,4 - DCP、MCP和4 - 氯苯酚是最佳底物。发现氯酚的积累会抑制氯苯氧基乙酸的降解,tfdB基因的失活增强了2,4 - DCP对食酸铜绿假单胞菌细胞的毒性作用。此外,通过TfdA的过表达增加氯酚的产生,也对食酸铜绿假单胞菌JMP134以及携带质粒pJP4的另一个宿主——嗜麦芽窄食单胞菌LB400的2,4 - D降解产生负面影响。这项工作的结果表明,pJP4中两个tfdB基因的编码和表达对于避免苯氧基乙酸降解过程中氯酚的毒性积累很重要,并且氯酚生成反应和氯酚消耗反应之间的平衡对于在这些化合物上生长是必要的。

相似文献

1
Chlorophenol hydroxylases encoded by plasmid pJP4 differentially contribute to chlorophenoxyacetic acid degradation.由质粒pJP4编码的氯酚羟化酶对氯苯氧基乙酸的降解有不同贡献。
Appl Environ Microbiol. 2006 Apr;72(4):2783-92. doi: 10.1128/AEM.72.4.2783-2792.2006.
2
Mutation analysis of the different tfd genes for degradation of chloroaromatic compounds in Ralstonia eutropha JMP134.在真养产碱杆菌JMP134中对不同tfd基因进行氯代芳香族化合物降解的突变分析。
Arch Microbiol. 2004 Feb;181(2):112-21. doi: 10.1007/s00203-003-0634-4. Epub 2003 Dec 16.
3
Characterization of a second tfd gene cluster for chlorophenol and chlorocatechol metabolism on plasmid pJP4 in Ralstonia eutropha JMP134(pJP4).在嗜麦芽窄食单胞菌JMP134(pJP4)中对质粒pJP4上用于氯酚和氯儿茶酚代谢的第二个tfd基因簇的表征。
J Bacteriol. 2000 Aug;182(15):4165-72. doi: 10.1128/JB.182.15.4165-4172.2000.
4
Molecular characterization of a deletion/duplication rearrangement in tfd genes from Ralstonia eutropha JMP134(pJP4) that improves growth on 3-chlorobenzoic acid but abolishes growth on 2,4-dichlorophenoxyacetic acid.来自真养产碱菌JMP134(pJP4)的tfd基因中缺失/重复重排的分子特征,该重排改善了菌株在3-氯苯甲酸上的生长,但消除了其在2,4-二氯苯氧乙酸上的生长。
Microbiology (Reading). 2001 Aug;147(Pt 8):2141-2148. doi: 10.1099/00221287-147-8-2141.
5
Capture of a catabolic plasmid that encodes only 2,4-dichlorophenoxyacetic acid:alpha-ketoglutaric acid dioxygenase (TfdA) by genetic complementation.通过基因互补捕获仅编码2,4-二氯苯氧乙酸:α-酮戊二酸双加氧酶(TfdA)的分解代谢质粒。
Appl Environ Microbiol. 1996 Jul;62(7):2470-6. doi: 10.1128/aem.62.7.2470-2476.1996.
6
Molecular and population analyses of a recombination event in the catabolic plasmid pJP4.分解代谢质粒pJP4中重组事件的分子与群体分析
J Bacteriol. 2006 Oct;188(19):6793-801. doi: 10.1128/JB.00869-06.
7
Comamonas acidovorans strain MC1: a new isolate capable of degrading the chiral herbicides dichlorprop and mecoprop and the herbicides 2,4-D and MCPA.食酸丛毛单胞菌MC1菌株:一种能够降解手性除草剂二氯丙酸和甲草胺以及除草剂2,4-滴和灭草灵的新分离菌株。
Microbiol Res. 1999 Dec;154(3):241-6. doi: 10.1016/S0944-5013(99)80021-4.
8
Transcription dynamics of the functional tfdA gene during MCPA herbicide degradation by Cupriavidus necator AEO106 (pRO101) in agricultural soil.在农业土壤中,食酸铜绿假单胞菌AEO106(pRO101)降解灭草灵除草剂过程中功能性tfdA基因的转录动态。
Environ Microbiol. 2008 Mar;10(3):571-9. doi: 10.1111/j.1462-2920.2007.01476.x. Epub 2008 Jan 7.
9
Isolation and characterization of a new plasmid from a Flavobacterium sp. which carries the genes for degradation of 2,4-dichlorophenoxyacetate.从一株黄杆菌中分离并鉴定出一种携带2,4-二氯苯氧乙酸降解基因的新质粒。
J Bacteriol. 1988 Sep;170(9):3897-902. doi: 10.1128/jb.170.9.3897-3902.1988.
10
The copy number of the catabolic plasmid pJP4 affects growth of Ralstonia eutropha JMP134 (pJP4) on 3-chlorobenzoate.分解代谢性质粒pJP4的拷贝数影响真养产碱菌JMP134(pJP4)在3-氯苯甲酸上的生长。
FEMS Microbiol Lett. 2002 Jun 18;212(1):95-100. doi: 10.1111/j.1574-6968.2002.tb11250.x.

引用本文的文献

1
A dedicated flavin-dependent monooxygenase catalyzes the hydroxylation of demethoxyubiquinone into ubiquinone (coenzyme Q) in Arabidopsis.一个专一的黄素依赖性单加氧酶在拟南芥中催化脱甲氧基泛醌转化为泛醌(辅酶 Q)。
J Biol Chem. 2021 Nov;297(5):101283. doi: 10.1016/j.jbc.2021.101283. Epub 2021 Oct 6.
2
Plastics and the microbiome: impacts and solutions.塑料与微生物群落:影响与解决方案
Environ Microbiome. 2021 Jan 20;16(1):2. doi: 10.1186/s40793-020-00371-w.
3
Biodegradation of Pesticides at the Limit: Kinetics and Microbial Substrate Use at Low Concentrations.农药在极限条件下的生物降解:低浓度下的动力学和微生物底物利用
Front Microbiol. 2020 Aug 27;11:2107. doi: 10.3389/fmicb.2020.02107. eCollection 2020.
4
Molecular basis for enantioselective herbicide degradation imparted by aryloxyalkanoate dioxygenases in transgenic plants.芳基烷酸双加氧酶在转基因植物中赋予对映选择性除草剂降解的分子基础。
Proc Natl Acad Sci U S A. 2019 Jul 2;116(27):13299-13304. doi: 10.1073/pnas.1900711116. Epub 2019 Jun 17.
5
Genome-Wide Analysis of Transcriptional Changes and Genes That Contribute to Fitness during Degradation of the Anthropogenic Pollutant Pentachlorophenol by Sphingobium chlorophenolicum.嗜氯酚鞘氨醇菌降解人为污染物五氯酚过程中对适应性有贡献的转录变化和基因的全基因组分析
mSystems. 2018 Nov 20;3(6). doi: 10.1128/mSystems.00275-18. eCollection 2018 Nov-Dec.
6
Diversity and Activity of Communities Inhabiting Plastic Debris in the North Pacific Gyre.北太平洋环流中栖息在塑料碎片上的群落的多样性与活性
mSystems. 2016 May 17;1(3). doi: 10.1128/mSystems.00024-16. eCollection 2016 May-Jun.
7
Biochemical and Genetic Bases of Indole-3-Acetic Acid (Auxin Phytohormone) Degradation by the Plant-Growth-Promoting Rhizobacterium Paraburkholderia phytofirmans PsJN.植物促生根际细菌类伯克霍尔德氏菌PsJN降解吲哚-3-乙酸(生长素植物激素)的生化和遗传基础
Appl Environ Microbiol. 2016 Dec 15;83(1). doi: 10.1128/AEM.01991-16. Print 2017 Jan 1.
8
Molecular perspectives and recent advances in microbial remediation of persistent organic pollutants.持久性有机污染物微生物修复的分子视角与最新进展
Environ Sci Pollut Res Int. 2016 Sep;23(17):16883-903. doi: 10.1007/s11356-016-6887-7. Epub 2016 May 28.
9
Hierarchy of Carbon Source Utilization in Soil Bacteria: Hegemonic Preference for Benzoate in Complex Aromatic Compound Mixtures Degraded by Cupriavidus pinatubonensis Strain JMP134.土壤细菌中碳源利用的层级结构:在被皮纳图博贪铜菌菌株JMP134降解的复杂芳香族化合物混合物中对苯甲酸盐的主导偏好。
Appl Environ Microbiol. 2015 Jun 15;81(12):3914-24. doi: 10.1128/AEM.04207-14. Epub 2015 Mar 20.
10
Evolutions of microbial degradation pathways for parent xenobiotic and for its metabolites follow different schemes.污染物母体及其代谢物的微生物降解途径的演变遵循不同的模式。
Environ Sci Pollut Res Int. 2012 Sep;19(8):3276-81. doi: 10.1007/s11356-012-0841-0. Epub 2012 Mar 16.

本文引用的文献

1
Biodegradation of 2,4-Dichlorophenol through a Distal meta-Fission Pathway.通过末端 meta 断裂途径对 2,4-二氯苯酚的生物降解。
Appl Environ Microbiol. 1997 May;63(5):2054-7. doi: 10.1128/aem.63.5.2054-2057.1997.
2
Genetic organization of the catabolic plasmid pJP4 from Ralstonia eutropha JMP134 (pJP4) reveals mechanisms of adaptation to chloroaromatic pollutants and evolution of specialized chloroaromatic degradation pathways.来自真养产碱菌JMP134的分解代谢质粒pJP4(pJP4)的基因组织揭示了对氯代芳香族污染物的适应机制以及特殊氯代芳香族降解途径的进化。
Environ Microbiol. 2004 Jul;6(7):655-68. doi: 10.1111/j.1462-2920.2004.00596.x.
3
Toxicity caused by hydroxycinnamoyl-coenzyme A thioester accumulation in mutants of Acinetobacter sp. strain ADP1.不动杆菌属ADP1菌株突变体中羟基肉桂酰辅酶A硫酯积累引起的毒性
Appl Environ Microbiol. 2004 May;70(5):2974-83. doi: 10.1128/AEM.70.5.2974-2983.2004.
4
Mutation analysis of the different tfd genes for degradation of chloroaromatic compounds in Ralstonia eutropha JMP134.在真养产碱杆菌JMP134中对不同tfd基因进行氯代芳香族化合物降解的突变分析。
Arch Microbiol. 2004 Feb;181(2):112-21. doi: 10.1007/s00203-003-0634-4. Epub 2003 Dec 16.
5
3- and 4-alkylphenol degradation pathway in Pseudomonas sp. strain KL28: genetic organization of the lap gene cluster and substrate specificities of phenol hydroxylase and catechol 2,3-dioxygenase.假单胞菌属菌株KL28中3-和4-烷基苯酚降解途径:lap基因簇的遗传组织以及苯酚羟化酶和儿茶酚2,3-双加氧酶的底物特异性
Microbiology (Reading). 2003 Nov;149(Pt 11):3265-3277. doi: 10.1099/mic.0.26628-0.
6
A transposon encoding the complete 2,4-dichlorophenoxyacetic acid degradation pathway in the alkalitolerant strain Delftia acidovorans P4a.一个在耐碱菌株代尔夫特食酸菌P4a中编码完整2,4-二氯苯氧乙酸降解途径的转座子。
Microbiology (Reading). 2003 Sep;149(Pt 9):2545-2556. doi: 10.1099/mic.0.26260-0.
7
Efficient turnover of chlorocatechols is essential for growth of Ralstonia eutropha JMP134(pJP4) in 3-chlorobenzoic acid.氯代儿茶酚的有效周转对于嗜麦芽窄食单胞菌JMP134(pJP4)在3-氯苯甲酸中的生长至关重要。
J Bacteriol. 2003 Mar;185(5):1534-42. doi: 10.1128/JB.185.5.1534-1542.2003.
8
Construction and evaluation of plasmid vectors optimized for constitutive and regulated gene expression in Burkholderia cepacia complex isolates.洋葱伯克霍尔德菌复合体分离株中用于组成型和调控型基因表达的优化质粒载体的构建与评价
Appl Environ Microbiol. 2002 Dec;68(12):5956-64. doi: 10.1128/AEM.68.12.5956-5964.2002.
9
Importance of different tfd genes for degradation of chloroaromatics by Ralstonia eutropha JMP134.不同tfd基因对嗜麦芽窄食单胞菌JMP134降解氯代芳烃的重要性。
J Bacteriol. 2002 Aug;184(15):4054-64. doi: 10.1128/JB.184.15.4054-4064.2002.
10
The kinetics of salicylate hydroxylase reaction.
FEBS Lett. 1970 Feb 25;6(4):305-308. doi: 10.1016/0014-5793(70)80084-9.