• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

脊椎动物DNA转座子作为一种天然诱变剂:青鳉鱼Tol2元件对遗传变异有贡献且无明显痕迹。

Vertebrate DNA transposon as a natural mutator: the medaka fish Tol2 element contributes to genetic variation without recognizable traces.

作者信息

Koga Akihiko, Iida Atsuo, Hori Hiroshi, Shimada Atsuko, Shima Akihiro

机构信息

Division of Biological Science, Graduate School of Science, Nagoya University, Nagoya, Japan.

出版信息

Mol Biol Evol. 2006 Jul;23(7):1414-9. doi: 10.1093/molbev/msl003. Epub 2006 May 3.

DOI:10.1093/molbev/msl003
PMID:16672286
Abstract

DNA-based transposable elements, or DNA transposons, transpose in a cut-and-paste fashion, involving excision from the chromosome. If this process affects the function of a host gene and the excision rate is high, any gene associated with such an element would clearly be in a genetically "unstable" state, and there are many examples of unstable genes in various organisms. However, none have hitherto been reported in vertebrates. We here document the finding of an unstable mutant gene in the medaka fish, Oryzias latipes, a useful model animal for vertebrate genetics and evolutionary studies. In an inbred strain, excision of the Tol2 element inserted in a pigmentation gene occurs spontaneously, giving rise to different heritable phenotypes and new mutant genes that carry different excision footprint sequences. The phenotypic mutation rate is as high as 2% per gamete, representing a 1000-fold increase from spontaneous mutation rates so far determined with the same organism. With mutations caused by insertion, and then excision, of transposons, one can no longer recognize participation of transposons in their generation. Thus, the impact of DNA transposons on vertebrate genomes may be, and may have been, larger than commonly supposed.

摘要

基于DNA的转座元件,即DNA转座子,以“剪切和粘贴”的方式进行转座,包括从染色体上切除。如果这个过程影响宿主基因的功能且切除率很高,那么与这种元件相关的任何基因显然都处于遗传“不稳定”状态,而且在各种生物体中有许多不稳定基因的例子。然而,迄今为止在脊椎动物中尚未有相关报道。我们在此记录了在青鳉(Oryzias latipes)中发现的一个不稳定突变基因,青鳉是用于脊椎动物遗传学和进化研究的一种有用的模式动物。在一个近交系中,插入色素沉着基因中的Tol2元件会自发切除,产生不同的可遗传表型以及携带不同切除足迹序列的新突变基因。表型突变率高达每配子2%,比目前用同一生物体测定的自发突变率高出1000倍。由于转座子插入然后切除导致突变,人们无法再识别转座子在其产生过程中的参与情况。因此,DNA转座子对脊椎动物基因组的影响可能一直比通常认为的要大。

相似文献

1
Vertebrate DNA transposon as a natural mutator: the medaka fish Tol2 element contributes to genetic variation without recognizable traces.脊椎动物DNA转座子作为一种天然诱变剂:青鳉鱼Tol2元件对遗传变异有贡献且无明显痕迹。
Mol Biol Evol. 2006 Jul;23(7):1414-9. doi: 10.1093/molbev/msl003. Epub 2006 May 3.
2
Excision of the Tol2 transposable element of the medaka fish Oryzias latipes in Xenopus laevis and Xenopus tropicalis.在非洲爪蟾和热带爪蟾中切除青鳉鱼的Tol2转座元件。
Gene. 2004 Aug 18;338(1):93-8. doi: 10.1016/j.gene.2004.05.013.
3
PCR detection of excision suggests mobility of the medaka fish Tol1 transposable element in the frog Xenopus laevis.聚合酶链式反应(PCR)检测切除情况表明,青鳉鱼Tol1转座元件在非洲爪蟾中有移动性。
Genet Res. 2007 Aug;89(4):201-6. doi: 10.1017/S0016672307008889.
4
Targeted reduction of the DNA methylation level with 5-azacytidine promotes excision of the medaka fish Tol2 transposable element.用5-氮杂胞苷靶向降低DNA甲基化水平可促进青鳉鱼Tol2转座元件的切除。
Genet Res. 2006 Jun;87(3):187-93. doi: 10.1017/S0016672306008184.
5
Tol2 transposon-mediated transgenesis in Xenopus tropicalis.Tol2转座子介导的热带爪蟾转基因技术。
Genesis. 2006 Sep;44(9):438-45. doi: 10.1002/dvg.20234.
6
Spontaneous germline excision of Tol1, a DNA-based transposable element naturally occurring in the medaka fish genome.Tol1(一种自然存在于青鳉鱼基因组中的基于DNA的转座元件)的自发种系切除。
Genome. 2014 Apr;57(4):193-9. doi: 10.1139/gen-2014-0011. Epub 2014 May 12.
7
Germline transgenesis of zebrafish using the medaka Tol1 transposon system.使用青鳉Tol1转座子系统对斑马鱼进行种系转基因。
Dev Dyn. 2008 Sep;237(9):2466-74. doi: 10.1002/dvdy.21688.
8
Transposition of the vertebrate Tol2 transposable element in Drosophila melanogaster.脊椎动物Tol2转座元件在黑腹果蝇中的转座。
Gene. 2008 Dec 1;425(1-2):64-8. doi: 10.1016/j.gene.2008.08.008. Epub 2008 Aug 15.
9
Excision of the tol2 transposable element of the medaka fish, Oryzias latipes, in zebrafish, Danio rerio.在斑马鱼(Danio rerio)中切除青鳉鱼(Oryzias latipes)的tol2转座元件。
Gene. 1998 Dec 28;225(1-2):17-22. doi: 10.1016/s0378-1119(98)00537-x.
10
Transposition mechanisms and biotechnology applications of the medaka fish Tol2 transposable element.青鳉鱼Tol2转座元件的转座机制及生物技术应用
Adv Biophys. 2004;38:161-80.

引用本文的文献

1
Methylation of lysine 36 on histone H3 is required to control transposon activities in somatic cells.组蛋白 H3 赖氨酸 36 的甲基化对于控制体细胞中转座子的活性是必需的。
Life Sci Alliance. 2023 May 11;6(8). doi: 10.26508/lsa.202201832. Print 2023 Aug.
2
Eusociality in snapping shrimps is associated with larger genomes and an accumulation of transposable elements.招潮蟹的群居性与较大的基因组和转座因子的积累有关。
Proc Natl Acad Sci U S A. 2021 Jun 15;118(24). doi: 10.1073/pnas.2025051118.
3
TE studies in Japan: the fourth Japanese meeting on host-transposon interactions.
日本的转座子研究:第四届日本宿主 - 转座子相互作用会议
Mob DNA. 2019 Mar 15;10:11. doi: 10.1186/s13100-019-0154-7. eCollection 2019.
4
De Novo characterization of transcriptomes from two North American Papaipema stem-borers (Lepidoptera: Noctuidae).对两种北美茎蛀夜蛾(鳞翅目:夜蛾科)转录组的从头表征。
PLoS One. 2018 Jan 24;13(1):e0191061. doi: 10.1371/journal.pone.0191061. eCollection 2018.
5
Production of the medaka derived from vitrified whole testes by germ cell transplantation.通过生殖细胞移植生产来自玻璃化的整体精巢的青鳉鱼。
Sci Rep. 2017 Mar 3;7:43185. doi: 10.1038/srep43185.
6
Evolution and Diversity of Transposable Elements in Vertebrate Genomes.脊椎动物基因组中转座元件的进化与多样性
Genome Biol Evol. 2017 Jan 1;9(1):161-177. doi: 10.1093/gbe/evw264.
7
TRT, a Vertebrate and Protozoan Tc1-Like Transposon: Current Activity and Horizontal Transfer.TRT,一种脊椎动物和原生动物中类似Tc1的转座子:当前活性与水平转移
Genome Biol Evol. 2016 Oct 5;8(9):2994-3005. doi: 10.1093/gbe/evw213.
8
The industrial melanism mutation in British peppered moths is a transposable element.英国胡椒蛾的工业黑化突变是一个可移动元素。
Nature. 2016 Jun 2;534(7605):102-5. doi: 10.1038/nature17951.
9
Evolutionary impact of transposable elements on genomic diversity and lineage-specific innovation in vertebrates.转座元件对脊椎动物基因组多样性和谱系特异性创新的进化影响。
Chromosome Res. 2015 Sep;23(3):505-31. doi: 10.1007/s10577-015-9493-5.
10
Repetitive sequences originating from the centromere constitute large-scale heterochromatin in the telomere region in the siamang, a small ape.来自着丝粒的重复序列构成了暹罗猩猩(一种小型猿类)端粒区域内的大规模异染色质。
Heredity (Edinb). 2012 Sep;109(3):180-7. doi: 10.1038/hdy.2012.28. Epub 2012 Jun 6.