Li Dawei, Collier David A, He Lin
Bio-X Center, Shanghai Jiao Tong University, Shanghai, China.
Hum Mol Genet. 2006 Jun 15;15(12):1995-2002. doi: 10.1093/hmg/ddl122. Epub 2006 May 10.
Chromosome 8p22-p11 has been identified as a locus for schizophrenia in several genome-wide scans and confirmed by meta-analysis of published linkage data. Systematic fine mapping using extended Icelandic pedigrees identified an associated haplotype in the gene neuregulin 1 (NRG1), also known as heuregulin, glial growth factor, NDF43 and ARIA. A 290 kb core at risk haplotype at the 5' end of the gene (HAP(ICE)), defined by five SNPs and two microsatellite polymorphisms was found to be associated with schizophrenia in the Icelandic and Scottish populations. A number of subsequent independent studies have attempted to replicate the association, and while some have been successful, the associated haplotype is not always HAP(ICE). Furthermore, no obviously functional or pathogenic variants have been identified, and the relationship between the gene and schizophrenia has remained inconclusive. To reconcile these conflicting findings and to give a comprehensive picture of the genetic architecture of this important gene, we performed a meta-analysis of 13 published population-based and family-based association studies up to November 2005. We analysed data from the SNP markers SNP8NRG241930, SNP8NRG243177, SNP8NRG221132 and SNP8NRG221533, and the microsatellite markers 478B14-848, 420M9-1395. Across these studies, strong positive association was found for all six polymorphisms. The haplotype analysis also showed significant association in the pooled international populations (OR=1.22, 95% CI 1.15-1.3, P=8 x 10(-10)). In Asian populations, the risk haplotype was focused around the two microsatellite markers, 478B14-848, 420M9-1395 (haplotype block B), and in Caucasian populations with the remaining four SNP markers (haplotype block A). This meta-analysis supports the involvement of NRG1 in the pathogenesis of schizophrenia, but with association between two different but adjacent haplotypes blocks in the Caucasian and Asian populations.
在多项全基因组扫描中,8号染色体的p22 - p11区域已被确定为精神分裂症的一个基因座,并通过对已发表的连锁数据进行荟萃分析得到了证实。利用冰岛扩展家系进行的系统精细定位,在神经调节蛋白1(NRG1)基因中确定了一个相关单倍型,该基因也被称为赫里古林、神经胶质生长因子、NDF43和ARIA。在该基因5'端发现了一个由五个单核苷酸多态性(SNP)和两个微卫星多态性定义的290 kb核心风险单倍型(HAP(ICE)),它在冰岛和苏格兰人群中与精神分裂症相关。随后的一些独立研究试图重复这种关联,虽然有些研究取得了成功,但相关单倍型并不总是HAP(ICE)。此外,尚未发现明显具有功能或致病性的变异,该基因与精神分裂症之间的关系仍不明确。为了调和这些相互矛盾的研究结果,并全面了解这个重要基因的遗传结构,我们对截至2005年11月发表的13项基于人群和家系的关联研究进行了荟萃分析。我们分析了SNP标记SNP8NRG241930、SNP8NRG243177、SNP8NRG221132和SNP8NRG221533以及微卫星标记478B14 - 848、420M9 - 1395的数据。在这些研究中,发现所有这六个多态性都存在强正相关。单倍型分析也显示在合并的国际人群中存在显著关联(比值比=1.22,95%置信区间1.15 - 1.3,P = 8×10⁻¹⁰)。在亚洲人群中,风险单倍型集中在两个微卫星标记478B14 - 848、420M9 - 1395周围(单倍型块B),而在白种人群中则与其余四个SNP标记相关(单倍型块A)。这项荟萃分析支持NRG1参与精神分裂症的发病机制,但在白种人和亚洲人群中,关联存在于两个不同但相邻的单倍型块之间。