Burnell Jim N, Chastain Chris J
Department of Biochemistry and Molecular Biology, James Cook University, Townsville, Qld 4811, Australia.
Biochem Biophys Res Commun. 2006 Jun 30;345(2):675-80. doi: 10.1016/j.bbrc.2006.04.150. Epub 2006 May 4.
Pyruvate, orthophosphate dikinase (PPDK; E.C. 2.7.9.1) catalyzes the synthesis of the primary inorganic carbon acceptor, phosphoenolpyruvate in the C4 photosynthetic pathway and is reversibly regulated by light. PPDK regulatory protein (RP), a bifunctional serine/threonine kinase-phosphatase, catalyzes both the ADP-dependent inactivation and the Pi-dependent activation of PPDK. Attempts to clone the RP have to date proven unsuccessful. A bioinformatics approach was taken to identify the nucleotide and amino acid sequence of the protein. Based on previously established characteristics including molecular mass, known inter- and intracellular location, functionality, and low level of expression, available databases were interrogated to ultimately identify a single candidate gene. In this paper, we describe the nucleotide and deduced amino acid sequence of this gene and establish its identity as maize PPDK RP by in vitro analysis of its catalytic properties via the cloning and expression of the recombinant protein.
丙酮酸,磷酸二激酶(PPDK;E.C. 2.7.9.1)在C4光合途径中催化主要无机碳受体磷酸烯醇式丙酮酸的合成,并受光的可逆调节。PPDK调节蛋白(RP)是一种双功能丝氨酸/苏氨酸激酶-磷酸酶,催化PPDK的ADP依赖性失活和Pi依赖性激活。迄今为止,克隆RP的尝试均未成功。我们采用生物信息学方法来确定该蛋白的核苷酸和氨基酸序列。基于先前确定的包括分子量、已知的细胞间和细胞内定位、功能以及低表达水平等特征,对可用数据库进行查询,最终确定了一个单一的候选基因。在本文中,我们描述了该基因的核苷酸和推导的氨基酸序列,并通过克隆和表达重组蛋白对其催化特性进行体外分析,确定其为玉米PPDK RP。