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磷酸转移不是ROCK I催化的激酶反应的限速步骤。

Phosphoryl transfer is not rate-limiting for the ROCK I-catalyzed kinase reaction.

作者信息

Futer Olga, Saadat Ahmad R, Doran John D, Raybuck Scott A, Pazhanisamy S

机构信息

Vertex Pharmaceuticals Incorporated, 130 Waverly Street, Cambridge, Massachusetts 02139-4242, USA.

出版信息

Biochemistry. 2006 Jun 27;45(25):7913-23. doi: 10.1021/bi052468q.

Abstract

Rho-associated coiled-coil kinase, ROCK, is implicated in Rho-mediated cell adhesion and smooth muscle contraction. Animal models suggest that the inhibition of ROCK can ameliorate conditions, such as vasospasm, hypertension, and inflammation. As part of our effort to design novel inhibitors of ROCK, we investigated the kinetic mechanism of ROCK I. Steady-state bisubstrate kinetics, inhibition kinetics, isotope partition analysis, viscosity effects, and presteady-state kinetics were used to explore the kinetic mechanism. Plots of reciprocals of initial rates obtained in the presence of nonhydrolyzable ATP analogues and the small molecule inhibitor of ROCK, Y-27632, against the reciprocals of the peptide concentrations yielded parallel lines (uncompetitive pattern). This pattern is indicative of an ordered binding mechanism, with the peptide adding first. The staurosporine analogue K252a, however, gave a noncompetitive pattern. When a pulse of (33)P-gamma-ATP mixed with ROCK was chased with excess unlabeled ATP and peptide, 0.66 enzyme equivalent of (33)P-phosphate was incorporated into the product in the first turnover. The presence of ATPase activity coupled with the isotope partition data is a clear evidence for the existence of a viable [E-ATP] complex in the kinase reaction and implicates a random binding mechanism. The k(cat)/K(m) parameters were fully sensitive to viscosity (viscosity effects of 1.4 +/- 0.2 and 0.9 +/- 0.3 for ATP and peptide 5, respectively), and therefore, the barriers to dissociation of either substrate are higher than the barrier for the phosphoryl transfer step. As a consequence, not all the binding steps are at fast equilibrium. The observation of a burst in presteady-state kinetics (k(b) = 10.2 +/- 2.1 s(-)(1)) and the viscosity effect on k(cat) of 1.3 +/- 0.2 characterize the phosphoryl transfer step to be fast and the release of product and/or the enzyme isomerization step accompanying it as rate-limiting at V(max) conditions. From the multiple kinetic studies, most of the rate constants for the individual steps were either evaluated or estimated.

摘要

Rho相关卷曲螺旋激酶(ROCK)与Rho介导的细胞黏附和平滑肌收缩有关。动物模型表明,抑制ROCK可改善诸如血管痉挛、高血压和炎症等病症。作为我们设计新型ROCK抑制剂工作的一部分,我们研究了ROCK I的动力学机制。采用稳态双底物动力学、抑制动力学、同位素分配分析、黏度效应和预稳态动力学来探究该动力学机制。在存在不可水解的ATP类似物和ROCK的小分子抑制剂Y-27632的情况下,以初始速率的倒数对肽浓度的倒数作图,得到平行线(非竞争性模式)。这种模式表明是一种有序结合机制,肽先结合。然而,星形孢菌素类似物K252a呈现非竞争性模式。当用过量未标记的ATP和肽追踪与ROCK混合的(33)P-γ-ATP脉冲时,在第一次周转中0.66个酶当量的(33)P-磷酸被掺入产物中。ATP酶活性的存在以及同位素分配数据清楚地证明在激酶反应中存在一种可行的[E-ATP]复合物,并暗示一种随机结合机制。k(cat)/K(m)参数对黏度完全敏感(ATP和肽5的黏度效应分别为1.4±0.2和0.9±0.3),因此,任一底物解离的障碍高于磷酰基转移步骤的障碍。结果,并非所有的结合步骤都处于快速平衡状态。预稳态动力学中爆发的观察结果(k(b)=10.2±2.1 s(-1))以及黏度对k(cat)的1.3±0.2的效应表明,在V(max)条件下,磷酰基转移步骤很快,而产物的释放和/或伴随它的酶异构化步骤是限速步骤。从多项动力学研究中,对各个步骤的大多数速率常数进行了评估或估算。

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