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4C1 D-葡萄糖醛酸构象空间的密度泛函研究

Density functional study of the conformational space of 4C1 D-glucuronic acid.

作者信息

Nyerges Balázs, Kovács Attila

机构信息

Institute of General and Analytical Chemistry, and Research Group of Technical Analytical Chemistry of the Hungarian Academy of Sciences, Budapest University of Technology and Economics, H-1111 Budapest, Szt. Gellért tér 4, Hungary.

出版信息

J Phys Chem A. 2005 Feb 10;109(5):892-7. doi: 10.1021/jp047451g.

Abstract

The conformational space of (4)C(1) alpha- and beta-d-glucuronic acid was scanned by HF/3-21G(p) calculations followed by optimization of the 15 most stable structures for each, using the B3LYP density functional theory method in conjunction with a diffuse polarized valence triple-zeta basis set. We found a general preference of the alpha anomers in the isolated molecules in agreement with the large endo-anomeric hyperconjugation effects in these structures. From the other intramolecular interactions (exo-anomeric hyperconjugation, hydrogen-bonding, dipole-dipole, and steric interactions), the effect of the hydrogen bonding is the most pronounced and plays a major role in determining the stability order within the alpha and beta series. The most stable conformer of both alpha and beta (4)C(1) d-glucuronic acid is the structure with the maximum number (5) of intramolecular hydrogen bonds. Introduction of solvent (water) effects by the SCI-PCM model resulted in two characteristic changes of the energetic properties: the gas-phase stability order changed considerably, and the energy range of the 15 most stable conformers decreased from 30 to 15 kJ/mol. The geometrical parameters reflect well the superimposed effects of hyperconjugation and hydrogen-bonding interactions. Most characteristics are the variations of the C-O bond distances (within a range of 0.04 A) upon the combined intramolecular effects.

摘要

通过HF/3 - 21G(p)计算扫描(4)C(1)α - 和β - D - 葡糖醛酸的构象空间,随后使用B3LYP密度泛函理论方法结合弥散极化价三重ζ基组对每种的15个最稳定结构进行优化。我们发现,在孤立分子中,α异头物具有普遍优势,这与这些结构中较大的内异头超共轭效应一致。从其他分子内相互作用(外异头超共轭、氢键、偶极 - 偶极和空间相互作用)来看,氢键的影响最为显著,并且在确定α和β系列内的稳定性顺序中起主要作用。α和β(4)C(1) D - 葡糖醛酸最稳定的构象异构体是具有最大分子内氢键数(5个)的结构。通过SCI - PCM模型引入溶剂(水)效应导致能量性质发生两个特征性变化:气相稳定性顺序发生显著变化,并且15个最稳定构象异构体的能量范围从30 kJ/mol降至15 kJ/mol。几何参数很好地反映了超共轭和氢键相互作用的叠加效应。最显著的特征是在分子内综合效应作用下C - O键距离的变化(在0.04 Å范围内)。

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