Balayssac Stéphane, Jiménez Beatriz, Piccioli Mario
Magnetic Resonance Center (CERM), Department of Chemistry, University of Florence, Via Luigi Sacconi 6, 50019 Sesto Fiorentino (FI), Italy.
J Magn Reson. 2006 Oct;182(2):325-9. doi: 10.1016/j.jmr.2006.06.021. Epub 2006 Jul 17.
A novel experiment is proposed to provide inter-residue sequential correlations among carbonyl spins in (13)C detected, protonless NMR experiments. The COCO-TOCSY experiment connects, in proteins, two carbonyls separated from each other by three, four or even five bonds. The quantitative analysis provides structural information on backbone dihedral angles phi as well as on the side chain dihedral angles of Asx and Glx residues. This is the first dihedral angle constraint that can be obtained via a protonless approach. About 75% of backbone carbonyls in Calbindin D(9K), a 75 amino acid dicalcium protein, could be sequentially connected via a COCO-TOCSY spectrum. 49(3)J(C')(C') values were measured and related to backbone phi angles. Structural information can be extended to the side chain orientation of aminoacids containing carbonyl groups. Additionally, long range homonuclear coupling constants, (4)J(CC) and (5)J(CC), could be measured. This constitutes an unprecedented case for proteins of medium and small size.
有人提出了一项新颖的实验,以在无质子的、检测碳-13的核磁共振实验中提供羰基自旋之间的残基间序列相关性。COCO-TOCSY实验在蛋白质中连接了彼此相隔三个、四个甚至五个键的两个羰基。定量分析提供了关于主链二面角φ以及Asx和Glx残基侧链二面角的结构信息。这是首个可通过无质子方法获得的二面角约束。在一种由75个氨基酸组成的二钙蛋白——钙结合蛋白D(9K)中,约75%的主链羰基可通过COCO-TOCSY谱图进行序列连接。测量了49(3)J(C')(C')值并将其与主链φ角相关联。结构信息可扩展到含羰基氨基酸的侧链取向。此外,还可测量远程同核耦合常数(4)J(CC)和(5)J(CC)。对于中小尺寸的蛋白质而言,这是前所未有的情况。