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丙氨酸和丝氨酸的L型和D型在气相和本体水介质中的从头算和密度泛函研究。

Ab-initio and density functional study of L- and D-forms of alanine and serine in gas phase and bulk aqueous medium.

作者信息

Upadhyay D M, Rai Amareshwar Kumar, Rai D K, Singh A N, Kumar Anup

机构信息

Laser and Spectroscopy Laboratory, Department of Physics, B.H.U., Varanasi 221005, Uttar Pradesh, India.

出版信息

Spectrochim Acta A Mol Biomol Spectrosc. 2007 Apr;66(4-5):909-18. doi: 10.1016/j.saa.2006.04.030. Epub 2006 May 12.

Abstract

The molecular geometry of L and D-forms of alanine and serine in gas phase have been studied by using ab-initio quantum chemical calculations at the restricted Hartree-Fock (RHF) level by employing 6-31G and 6-311++G** basis sets. Subsequently, for considering the electron correlations, Density functional Calculations at the Becke3LYP (B3LYP) and Moller-Plesset second order (MP2) level of calculations have been carried out with the same basis sets for these optimized geometries. Effect of solvation in water on the optimized geometries was studied using the polarized continuum model of the self-consistent reaction field (SCRF) theory. The dipole moment, energy, polarizabilities and vibrational frequencies have been calculated in all cases. Frequency analysis was carried out to ensure that optimized geometry corresponds to a total energy minimum.

摘要

利用受限Hartree-Fock(RHF)水平的从头算量子化学计算,采用6-31G和6-311++G**基组,研究了气相中丙氨酸和丝氨酸的L型和D型分子几何结构。随后,为了考虑电子相关性,对这些优化几何结构使用相同基组在Becke3LYP(B3LYP)和Moller-Plesset二阶(MP2)计算水平上进行了密度泛函计算。使用自洽反应场(SCRF)理论的极化连续介质模型研究了水中溶剂化对优化几何结构的影响。在所有情况下都计算了偶极矩、能量、极化率和振动频率。进行频率分析以确保优化几何结构对应于总能量最小值。

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