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运用全证据贝叶斯方法对阿巴拉契亚地区色彩斑斓、能产生氰化物的千足虫(多足纲,瘤马陆科,阿菲洛里尼族)进行系统发育分析

Phylogenetic systematics of the colorful, cyanide-producing millipedes of Appalachia (Polydesmida, Xystodesmidae, Apheloriini) using a total evidence Bayesian approach.

作者信息

Marek Paul E, Bond Jason E

机构信息

Department of Biology, East Carolina University, Howell Science Complex N211A, Greenville, NC 27858, USA.

出版信息

Mol Phylogenet Evol. 2006 Dec;41(3):704-29. doi: 10.1016/j.ympev.2006.05.043. Epub 2006 Jun 8.

Abstract

Here, we provide an exemplar-approach phylogeny of the xystodesmid millipede tribe Apheloriini with a focus on genus-group relationships-particularly of the genus Brachoria. Exemplars for the phylogenetic analysis were chosen to represent the maximum breadth of morphological diversity within all nominal genera in the tribe Apheloriini, and to broadly sample the genus Brachoria. In addition, three closely related tribes were used (Rhysodesmini, Nannariini, and Pachydesmini). Morphological and DNA sequence data were scored for Bayesian inference of phylogeny. Phylogenetic analysis resulted in polyphyletic genera Brachoria and Sigmoria, a monophyletic Apheloriini, and a "southern clade" that contains most of the tribal species diversity. We used this phylogeny to track morphological character histories and reconstruct ancestral states using stochastic character mapping. Based on the findings from the character mapping study, the diagnostic feature of the genus Brachoria, the cingulum, evolved independently in two lineages. We compared our phylogeny against prior classifications using Bayes factor hypothesis-testing and found that our phylogenetic hypothesis is inconsistent with the previous hypotheses underlying the most recent classification. With our preferred total-evidence phylogeny as a framework for taxonomic modifications, we describe a new genus, Appalachioria; supply phylogenetic diagnoses of monophyletic taxa; and provide a phylogeny-based classification for the tribe Apheloriini.

摘要

在此,我们提供了一种示范法系统发育树,用于研究球马陆科阿菲洛里尼族,重点关注类群间的关系,尤其是布拉乔里亚属的关系。用于系统发育分析的示范样本被选来代表阿菲洛里尼族所有命名属内形态多样性的最大范围,并广泛采样布拉乔里亚属。此外,还使用了三个近缘部落(瑞斯德斯尼族、纳纳里尼族和帕基德斯尼族)。对形态学和DNA序列数据进行评分,以进行系统发育的贝叶斯推断。系统发育分析结果显示,布拉乔里亚属和西格莫里亚属为多系属,阿菲洛里尼族为单系族,以及一个包含该部落大部分物种多样性的“南方分支”。我们利用这个系统发育树来追踪形态特征的历史,并使用随机特征映射重建祖先状态。基于特征映射研究的结果,布拉乔里亚属的诊断特征——环带,在两个谱系中独立进化。我们使用贝叶斯因子假设检验将我们的系统发育树与先前的分类进行比较,发现我们的系统发育假设与最新分类所依据的先前假设不一致。以我们首选的全证据系统发育树作为分类修订的框架,我们描述了一个新属——阿巴拉契亚马陆属;提供了单系分类单元的系统发育诊断;并为阿菲洛里尼族提供了基于系统发育的分类。

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