Rotimi Charles N, Chen Guanjie, Adeyemo Adebowale A, Jones Leslie S, Agyenim-Boateng Kofi, Eghan Benjamin A, Zhou Jie, Doumatey Ayo, Lashley Karrie, Huang Hanxia, Fasanmade Olufemi, Akinsola Folasade B, Ezepue Felix, Amoah Albert, Akafo Stephen, Chen Yuanxiu, Oli Johnnie, Johnson Thomas
National Human Genome Center, Howard University, College of Medicine, Washington, DC 20059, USA.
Invest Ophthalmol Vis Sci. 2006 Aug;47(8):3262-7. doi: 10.1167/iovs.05-1537.
High intraocular pressure (IOP) is a major risk factor for glaucoma, one of the leading causes of blindness worldwide. Because it has been demonstrated that African populations are at increased risk for glaucoma, the authors investigated the genetic basis of IOP in a sample of West Africans with type 2 diabetes (T2D) from Ghana and Nigeria.
Genomewide linkage analysis was conducted for loci linked to IOP (measured by applanation tonometry) in 244 affected sibling pairs with T2D using 372 autosomal short-tandem repeat markers at an average spacing of 9 cM.
Multipoint variance components linkage analyses revealed suggestive linkage on chromosome 5 (5q22) with a logarithm of odds (LOD) score of 2.50 (nominal P = 0.0003; empiric P = 0.0004) and on chromosome 14 (14q22) with an LOD score of 2.95 (nominal P = 0.0001; empiric P = 0.0003). Fine mapping at a marker density of 2 cM in the 5q region confirmed the linkage signal, with an increase in peak LOD score to 4.91.
The strong signal on chromosome 5 lies in the region in which a novel gene, WDR36, in the GLC1G locus was recently identified as causative for adult-onset primary open-angle glaucoma and provides additional evidence that chromosome 5 contains susceptibility loci for glaucoma in multiple human populations. The evidence provided in this study is particularly important given the evolutionary history of these West African populations and the recent ancestral relationship to African Americans-a population with one of the highest rates of diabetes and associated complications (including glaucoma) in the world.
高眼压是青光眼的主要危险因素,青光眼是全球主要致盲原因之一。由于已有研究表明非洲人群患青光眼的风险增加,作者在来自加纳和尼日利亚的2型糖尿病(T2D)西非样本中研究了眼压的遗传基础。
使用平均间距为9 cM的372个常染色体短串联重复序列标记,对244对患T2D的患病同胞对中与眼压(通过压平眼压计测量)相关的基因座进行全基因组连锁分析。
多点方差成分连锁分析显示,5号染色体(5q22)上有提示性连锁,对数优势(LOD)得分为2.50(名义P = 0.0003;经验P = 0.0004),14号染色体(14q22)上LOD得分为2.95(名义P = 0.0001;经验P = 0.0003)。在5q区域以2 cM的标记密度进行精细定位证实了连锁信号,峰值LOD得分增加到4.91。
5号染色体上的强信号位于一个区域,在该区域中,GLC1G基因座中的一个新基因WDR36最近被确定为成人原发性开角型青光眼的病因,并提供了额外证据表明5号染色体包含多个人群中青光眼的易感基因座。鉴于这些西非人群的进化史以及与非裔美国人最近的祖先关系(非裔美国人是世界上糖尿病及其相关并发症(包括青光眼)发病率最高的人群之一),本研究提供的证据尤为重要。