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协同序列模块决定人类β-珠蛋白基因座的复制起始位点。

Cooperative sequence modules determine replication initiation sites at the human beta-globin locus.

作者信息

Wang Lixin, Lin Chii Mei, Lopreiato Joseph O, Aladjem Mirit I

机构信息

Laboratory of Molecular Pharmacology, National Cancer Institute, Bethesda, MD 20892, USA.

出版信息

Hum Mol Genet. 2006 Sep 1;15(17):2613-22. doi: 10.1093/hmg/ddl187. Epub 2006 Jul 28.

DOI:10.1093/hmg/ddl187
PMID:16877501
Abstract

The human beta globin locus contains two adjacent replicators, each capable of initiating DNA replication when transferred from its native locus to ectopic sites. Here, we report a detailed analysis of the sequence requirements for replication initiation from these replicators. In both replicators, initiation required a combination of an asymmetric purine:pyrimidine sequence and several AT-rich stretches. Modules from the two replicators could combine to initiate replication. AT-rich sequences were essential for replicator activity: a low frequency of initiation was observed in DNA fragments that included a short stretch of AT-rich sequences, whereas inclusion of additional AT-rich stretches increased initiation efficiency. By contrast, replication initiated at a low level without the asymmetric purine:pyrimidine modules but they were required in synergy to achieve efficient initiation. These data support a combinatorial model for replicator activity and suggest that the initiation of DNA replication requires interaction between at least two distinct sequence modules.

摘要

人类β珠蛋白基因座包含两个相邻的复制子,当从其天然基因座转移到异位位点时,每个复制子都能够启动DNA复制。在这里,我们报告了对这些复制子进行复制起始的序列要求的详细分析。在这两个复制子中,起始都需要不对称嘌呤:嘧啶序列和几个富含AT的片段的组合。来自两个复制子的模块可以组合起来启动复制。富含AT的序列对于复制子活性至关重要:在包含短的富含AT序列片段的DNA片段中观察到低频率的起始,而包含额外的富含AT的片段则提高了起始效率。相比之下,在没有不对称嘌呤:嘧啶模块的情况下,复制以低水平起始,但它们需要协同作用才能实现高效起始。这些数据支持复制子活性的组合模型,并表明DNA复制的起始需要至少两个不同序列模块之间的相互作用。

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